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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
V3V4_16S_mouseHoldemanella_25 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159966 https://www.ebi.ac.uk/ena/browser/view/ERR4159966
V3V4_16S_mouseHoldemanella_26 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159967 https://www.ebi.ac.uk/ena/browser/view/ERR4159967
V3V4_16S_mouseHoldemanella_27 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159968 https://www.ebi.ac.uk/ena/browser/view/ERR4159968
V3V4_16S_mouseHoldemanella_28 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159969 https://www.ebi.ac.uk/ena/browser/view/ERR4159969
BL_170124 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2024-01-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099105
BL_170220 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2020-02-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099068
BL_170314 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2014-03-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099069
BL_170404 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2017-04-04 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099106
BL_170425 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2025-04-17 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene True
BL_170509 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2017-05-09 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099114
BL_170606 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2017-06-06 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG False SAMEA14099117
BL_170704 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2017-07-04 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099071
BL_170801 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2017-08-01 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099118
BL_170913 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2013-09-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099076
BL_171010 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2010-10-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099120
BL_171106 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2017-11-06 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099078
BL_171212 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2012-12-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099121
rrn_operon_ONT_FMT_1 rrn operon ONT sequencing from human feces - FMT (IATA) Microbial Ecology, Nutrition and Health Human Netherlands Human gut Human feces, faecal microbiota transplantation (FMT) donors/recipients, metabolic syndrome subjects 2017 2017-04-10 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR3504838 https://www.ebi.ac.uk/ena/browser/view/ERR3504838
rrn_operon_ONT_FMT_2 rrn operon ONT sequencing from human feces - FMT (IATA) Microbial Ecology, Nutrition and Health Human Netherlands Human gut Human feces, faecal microbiota transplantation (FMT) donors/recipients, metabolic syndrome subjects 2017 2017-04-10 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR3504836 https://www.ebi.ac.uk/ena/browser/view/ERR3504836
rrn_operon_ONT_FMT_3 rrn operon ONT sequencing from human feces - FMT (IATA) Microbial Ecology, Nutrition and Health Human Netherlands Human gut Human feces, faecal microbiota transplantation (FMT) donors/recipients, metabolic syndrome subjects 2017 2017-04-10 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR3504837 https://www.ebi.ac.uk/ena/browser/view/ERR3504837
V3V4_16S_UCI_1 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-11-17 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416624 https://www.ebi.ac.uk/ena/browser/view/ERR3416624
V3V4_16S_UCI_2 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-08-03 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416625 https://www.ebi.ac.uk/ena/browser/view/ERR3416625
V3V4_16S_UCI_3 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416626 https://www.ebi.ac.uk/ena/browser/view/ERR3416626
V3V4_16S_UCI_4 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416627 https://www.ebi.ac.uk/ena/browser/view/ERR3416627
V3V4_16S_UCI_5 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416628 https://www.ebi.ac.uk/ena/browser/view/ERR3416628
V3V4_16S_UCI_6 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416629 https://www.ebi.ac.uk/ena/browser/view/ERR3416629
V3V4_16S_UCI_7 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416630 https://www.ebi.ac.uk/ena/browser/view/ERR3416630
V3V4_16S_UCI_8 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416631 https://www.ebi.ac.uk/ena/browser/view/ERR3416631
V3V4_16S_UCI_9 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416632 https://www.ebi.ac.uk/ena/browser/view/ERR3416632
V3V4_16S_UCI_10 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416633 https://www.ebi.ac.uk/ena/browser/view/ERR3416633
V3V4_16S_UCI_11 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416634 https://www.ebi.ac.uk/ena/browser/view/ERR3416634
V3V4_16S_UCI_12 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-03 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416635 https://www.ebi.ac.uk/ena/browser/view/ERR3416635
V3V4_16S_UCI_13 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-03 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416636 https://www.ebi.ac.uk/ena/browser/view/ERR3416636
V3V4_16S_UCI_14 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-11-01 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416637 https://www.ebi.ac.uk/ena/browser/view/ERR3416637
V3V4_16S_UCI_15 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-08-13 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416638 https://www.ebi.ac.uk/ena/browser/view/ERR3416638
V3V4_16S_UCI_16 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-22 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416639 https://www.ebi.ac.uk/ena/browser/view/ERR3416639
V3V4_16S_UCI_17 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-08-15 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416640 https://www.ebi.ac.uk/ena/browser/view/ERR3416640
V3V4_16S_UCI_18 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-08-15 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416641 https://www.ebi.ac.uk/ena/browser/view/ERR3416641
V3V4_16S_UCI_19 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-12-10 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416642 https://www.ebi.ac.uk/ena/browser/view/ERR3416642
V3V4_16S_UCI_20 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-08-10 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416643 https://www.ebi.ac.uk/ena/browser/view/ERR3416643
V3V4_16S_UCI_21 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-09 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416644 https://www.ebi.ac.uk/ena/browser/view/ERR3416644
V3V4_16S_UCI_22 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-25 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416645 https://www.ebi.ac.uk/ena/browser/view/ERR3416645
V3V4_16S_UCI_23 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-08 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416646 https://www.ebi.ac.uk/ena/browser/view/ERR3416646
V3V4_16S_UCI_24 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-25 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416647 https://www.ebi.ac.uk/ena/browser/view/ERR3416647
V3V4_16S_UCI_25 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-25 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416648 https://www.ebi.ac.uk/ena/browser/view/ERR3416648
V3V4_16S_UCI_26 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-25 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416649 https://www.ebi.ac.uk/ena/browser/view/ERR3416649
V3V4_16S_UCI_27 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-25 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416650 https://www.ebi.ac.uk/ena/browser/view/ERR3416650
V3V4_16S_UCI_28 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-06-28 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416651 https://www.ebi.ac.uk/ena/browser/view/ERR3416651
V3V4_16S_UCI_29 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-07 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416652 https://www.ebi.ac.uk/ena/browser/view/ERR3416652
V3V4_16S_UCI_30 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-07 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416653 https://www.ebi.ac.uk/ena/browser/view/ERR3416653