| Malaspina_bathypelagic_viral_4 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2011-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06265044 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_5 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2012-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06264751 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_6 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2013-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06266100 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_7 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2020-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06266133 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_8 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2022-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06264750 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_9 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2015-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06266141 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_10 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2013-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06264414 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_11 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2028-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06266142 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_12 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2026-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06266101 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_13 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2027-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06264749 |
|
|
|
|
|
|
| Malaspina_bathypelagic_viral_15 |
Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Mediterranean Sea |
Marine water |
Opean ocean salt water |
|
2029-08-15 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN06266102 |
|
|
|
|
|
|
| Malespina_metagenomes_22 |
Malaspina Expedition 2010 bathypelagic metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Marine samples from north of Cape Verde\; Atlantic ocean |
Marine water |
Opean ocean salt water |
2010 |
2022-12-10 |
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN05422183 |
|
|
|
|
|
|
| Oral_Intestinal_UlcerativeColitis_1 Metataxonomies |
|
|
|
|
Madrid |
Human gut, Human oral, Clinical / Hospital |
adult feces, Saliva, Patients and controls |
2021 |
|
|
Metataxonomics |
|
True |
PRJNA749643 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA749643/ |
| Intestinal_MetabolicSyndrom Metataxonomies |
|
|
|
|
Madrid |
Human gut, Clinical / Hospital |
adult feces, Patients and controls |
2021 |
|
|
Metataxonomics |
|
True |
PRJNA717111 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA717111 |
| Intestinal_UlcerativeColitis_2 Metataxonomies |
|
|
|
|
Madrid |
Human gut, Clinical / Hospital |
adult feces, Patients and controls |
2021 |
|
|
Metataxonomics |
|
True |
PRJNA749914 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA749914 |
| Intestinal_UlterativeColitis_3 Metataxonomies |
|
|
|
|
Madrid |
Human gut, Clinical / Hospital |
adult feces, Patients and controls |
2021 |
|
|
Metataxonomics |
|
True |
PRJNA749643 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA749643 |
| Intestinal_SARSCoV-2_1 Metagenomes |
|
|
|
|
Madrid |
Human gut, Clinical / Hospital |
adult feces, Patients and controls |
2021 |
|
Metagenomics (WGS) |
Metagenomics |
|
True |
PRJNA1099539 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1099539 |
| Intestinal_barrier_1 Metataxonomies |
Microbial metabolism and intestinal barrier |
Healthy individuals (adults) and nutritional interventions |
Microbioma, Alimentación y Salud (BEA) |
Human |
Madrid |
Human gut, Clinical / Hospital |
adult feces, Patients and controls |
2021 |
|
|
Metataxonomics |
|
True |
PRJNA731070 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA731070 |
| Dvex_SugAb1 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239524 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugAb2 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239525 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugAb3 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239526 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugAb5 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239527 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugBb1 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239528 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugBb2 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239529 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugBb3 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239530 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugBb4 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239531 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_SugBb5 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Sugashima |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Sugashima |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239532 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb1 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Aomori |
2020 |
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239519 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb2 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Aomori |
2020 |
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239520 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb3 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Aomori |
2020 |
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239521 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb4 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Aomori |
2020 |
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239522 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb5 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Aomori |
2020 |
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239523 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb1 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Aomori |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239519 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb2 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Aomori |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239520 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb3 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Aomori |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239521 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb4 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Aomori |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239522 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Aomb5 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Japan: Aomori |
Animal other |
Didemnum vexillum, tunic tissue, Japan: Aomori |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239523 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Venb1 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Italy: Venice |
Animal other |
Didemnum vexillum, tunic tissue, Italy: Venice |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239514 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Venb2 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Italy: Venice |
Animal other |
Didemnum vexillum, tunic tissue, Italy: Venice |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239515 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Venb3 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Italy: Venice |
Animal other |
Didemnum vexillum, tunic tissue, Italy: Venice |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239516 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Venb4 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Italy: Venice |
Animal other |
Didemnum vexillum, tunic tissue, Italy: Venice |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239517 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Dvex_Venb5 |
Didemnum vexillum microbiome - global survey (CEAB) |
|
Molecular ecology of marine benthos |
Animal |
Italy: Venice |
Animal other |
Didemnum vexillum, tunic tissue, Italy: Venice |
|
|
16S rRNA gene |
V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp |
|
True |
SAMN14239518 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/ |
| Malaspina_metatranscriptome_25 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:West of Perth\; Australia\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687303 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_50 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:West of Perth\; Australia\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687528 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_41 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:South of Port of Lincoln\; Great Australian Bight\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687586 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_40 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687585 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_49 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687584 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_39 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:East of Madagascar\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687492 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_24 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:East of Durban\; South Africa\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687540 |
|
|
|
|
|
|
| Malaspina_aerobic_bcateria_45 |
Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean: South Subtropical Convergence Province |
Marine water |
Opean ocean salt water |
2011 |
|
|
metaB |
|
True |
SAMN19606920 |
|
|
|
|
|
|
