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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
Stye_plic_SAMN35712931 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-04-24 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN35712931 4927.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN35712932 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-04-24 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN35712932 4837.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904637 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904637 5039.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904638 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904638 4994.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904639 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904639 5093.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904640 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904640 505.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904641 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904641 5016.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904642 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904642 5052.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904643 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904643 5163.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904644 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904644 5142.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904645 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904645 5099.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904646 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-04-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904646 504.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904647 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-04-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904647 5081.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904648 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-04-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904648 5081.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904649 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904649 5069.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904650 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904650 4995.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904651 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904651 505.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904652 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904652 492.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904653 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904653 4885.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904654 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904654 4962.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Fermented milk Metagenome Food metagenomes (IPLA) MicroHealth Food Antioquia; Colombia Food / Fermented artisanal suero costeΓ±o 2016 Metagenomics (WGS) Metagenomics True SRX2209117 to SRX2209122 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (6 months) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2024 Metataxonomics True SAMN38115097 to SAMN38115110 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (4-14 years) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2021 Metataxonomics True SAMN40261256 - SAMN40261275 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (<2 years) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2021 Metataxonomics True SAMN32161911 - SAMN32161919 and SAMN32320403 - SAMN32320411 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (6 months) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2023 Metataxonomics True SAMN34565804 to SAMN34565827 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (1 year) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2024 Metataxonomics True SAMN41921760 to SAMN41921783 https://www.ncbi.nlm.nih.gov/sra
Adult Metagenome Human adult metagenomes (IPLA) MicroHealth Human Principality of Asturias Human other bile samples of liver donors 2019 Metagenomics (WGS) Metagenomics True SRR6877525 to SRR6877527 https://www.ncbi.nlm.nih.gov/sra
Intestinal_barrier_1 Metataxonomies Microbial metabolism and intestinal barrier Healthy individuals (adults) and nutritional interventions Microbioma, AlimentaciΓ³n y Salud (BEA) Human Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metataxonomics True PRJNA731070 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA731070
rrn_operon_ONT_CeD_1 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777818 https://www.ebi.ac.uk/ena/browser/view/ERR12777818
rrn_operon_ONT_CeD_2 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777815 https://www.ebi.ac.uk/ena/browser/view/ERR12777815
rrn_operon_ONT_CeD_3 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777816 https://www.ebi.ac.uk/ena/browser/view/ERR12777816
rrn_operon_ONT_CeD_4 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777817 https://www.ebi.ac.uk/ena/browser/view/ERR12777817
rrn_operon_ONT_CeD_5 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777819 https://www.ebi.ac.uk/ena/browser/view/ERR12777819
rrn_operon_ONT_CeD_6 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777820 https://www.ebi.ac.uk/ena/browser/view/ERR12777820
rrn_operon_ONT_COVID_1 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945913 https://www.ebi.ac.uk/ena/browser/view/ERR15945913
rrn_operon_ONT_COVID_2 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945914 https://www.ebi.ac.uk/ena/browser/view/ERR15945914
rrn_operon_ONT_COVID_3 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945915 https://www.ebi.ac.uk/ena/browser/view/ERR15945915
rrn_operon_ONT_COVID_4 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945916 https://www.ebi.ac.uk/ena/browser/view/ERR15945916
rrn_operon_ONT_COVID_5 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945911 https://www.ebi.ac.uk/ena/browser/view/ERR15945911
rrn_operon_ONT_COVID_6 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945912 https://www.ebi.ac.uk/ena/browser/view/ERR15945912
rrn_operon_ONT_COVID_7 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424365 https://www.ebi.ac.uk/ena/browser/view/ERR17424365
rrn_operon_ONT_COVID_8 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424366 https://www.ebi.ac.uk/ena/browser/view/ERR17424366
rrn_operon_ONT_COVID_9 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424367 https://www.ebi.ac.uk/ena/browser/view/ERR17424367
rrn_operon_ONT_COVID_10 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424368 https://www.ebi.ac.uk/ena/browser/view/ERR17424368
rrn_operon_ONT_COVID_11 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424369 https://www.ebi.ac.uk/ena/browser/view/ERR17424369
rrn_operon_ONT_COVID_12 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424370 https://www.ebi.ac.uk/ena/browser/view/ERR17424370
rrn_operon_ONT_COVID_13 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424371 https://www.ebi.ac.uk/ena/browser/view/ERR17424371
rrn_operon_ONT_COVID_14 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424372 https://www.ebi.ac.uk/ena/browser/view/ERR17424372
rrn_operon_ONT_COVID_15 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424374 https://www.ebi.ac.uk/ena/browser/view/ERR17424374
rrn_operon_ONT_COVID_16 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424375 https://www.ebi.ac.uk/ena/browser/view/ERR17424375