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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
V3V4_16S_ratEV_53 V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Rat feces, mesenchymal stem cell-derived extracellular vesicles intervention 2022 2022-02-01 16S rRNA gene V3-V4 region amplicon sequencing (primers 341F/805R), Illumina MiSeq True ERR12397678 https://www.ebi.ac.uk/ena/browser/view/ERR12397678
V3V4_16S_ratEV_54 V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Rat feces, mesenchymal stem cell-derived extracellular vesicles intervention 2022 2022-02-01 16S rRNA gene V3-V4 region amplicon sequencing (primers 341F/805R), Illumina MiSeq True ERR12397681 https://www.ebi.ac.uk/ena/browser/view/ERR12397681
V3V4_16S_ratEV_55 V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Rat feces, mesenchymal stem cell-derived extracellular vesicles intervention 2022 2022-02-01 16S rRNA gene V3-V4 region amplicon sequencing (primers 341F/805R), Illumina MiSeq True ERR12397682 https://www.ebi.ac.uk/ena/browser/view/ERR12397682
V3V4_16S_ratEV_56 V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Rat feces, mesenchymal stem cell-derived extracellular vesicles intervention 2022 2022-02-01 16S rRNA gene V3-V4 region amplicon sequencing (primers 341F/805R), Illumina MiSeq True ERR12397637 https://www.ebi.ac.uk/ena/browser/view/ERR12397637
BL_210125 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2025-01-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG True
BL_210208 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2021-02-08 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_210309 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2021-03-09 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_210413 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2013-04-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_210511 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2011-05-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_210615 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2015-06-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_210706 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2021-07-06 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_210914 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2014-09-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_211013 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2013-10-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_211109 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2021-11-09 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
BL_211214 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2014-12-21 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
Children Metataxonomies (4-14 years) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2021 Metataxonomics True SAMN40261256 - SAMN40261275 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (<2 years) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2021 Metataxonomics True SAMN32161911 - SAMN32161919 and SAMN32320403 - SAMN32320411 https://www.ncbi.nlm.nih.gov/sra
Oral_Intestinal_UlcerativeColitis_1 Metataxonomies Madrid Human gut, Human oral, Clinical / Hospital adult feces, Saliva, Patients and controls 2021 Metataxonomics True PRJNA749643 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA749643/
Intestinal_MetabolicSyndrom Metataxonomies Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metataxonomics True PRJNA717111 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA717111
Intestinal_UlcerativeColitis_2 Metataxonomies Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metataxonomics True PRJNA749914 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA749914
Intestinal_UlterativeColitis_3 Metataxonomies Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metataxonomics True PRJNA749643 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA749643
Intestinal_SARSCoV-2_1 Metagenomes Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metagenomics (WGS) Metagenomics True PRJNA1099539 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1099539
Intestinal_barrier_1 Metataxonomies Microbial metabolism and intestinal barrier Healthy individuals (adults) and nutritional interventions Microbioma, AlimentaciΓ³n y Salud (BEA) Human Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metataxonomics True PRJNA731070 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA731070
Stye_plic_SAMN37904250 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904250 5083.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904251 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904251 5299.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904252 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904252 5081.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904253 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904253 5292.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904254 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904254 5148.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904255 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904255 5074.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904256 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904256 506.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904257 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904257 5226.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904258 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904258 5006.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904259 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-01-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904259 5233.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904260 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904260 4986.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904261 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904261 5203.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904262 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904262 5123.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904263 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904263 5023.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904264 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904264 5049.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904265 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904265 5025.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904266 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904266 511.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904267 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904267 5228.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904268 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-04-20 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904268 5354.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904269 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904269 5155.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904270 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904270 5308.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904271 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904271 5004.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904272 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904272 5262.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904273 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904273 4982.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904274 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904274 5334.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904275 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904275 4934.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904276 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-07-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904276 5034.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/