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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
shotgun_CalRest_159 Shotgun sequencing from human feces - caloric restriction intervention (IATA) Microbial Ecology, Nutrition and Health Human Human gut Human feces, overweight subjects, caloric restriction diet with fibre supplementation vs placebo Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina NovaSeq 6000, paired-end, size-fractionation library selection True ERX4279176 https://www.ebi.ac.uk/ena/browser/view/ERX4279176
shotgun_CalRest_160 Shotgun sequencing from human feces - caloric restriction intervention (IATA) Microbial Ecology, Nutrition and Health Human Human gut Human feces, overweight subjects, caloric restriction diet with fibre supplementation vs placebo Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina NovaSeq 6000, paired-end, size-fractionation library selection True ERX4279175 https://www.ebi.ac.uk/ena/browser/view/ERX4279175
Children Metataxonomies (6 months) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2024 Metataxonomics True SAMN38115097 to SAMN38115110 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (1 year) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2024 Metataxonomics True SAMN41921760 to SAMN41921783 https://www.ncbi.nlm.nih.gov/sra
BL_230110 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2010-01-23 Metagenomics (WGS) metaG False
BL_230214 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2010-02-23 Metagenomics (WGS) metaG False
BL_230314 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2014-03-23 Metagenomics (WGS) metaG False
BL_230412 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2012-04-23 Metagenomics (WGS) metaG False
BL_230516 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2016-05-23 Metagenomics (WGS) metaG False
BL_230613 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2013-06-23 Metagenomics (WGS) metaG False
BL_230704 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2023-07-04 Metagenomics (WGS) metaG False
BL_230801 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2023-08-01 Metagenomics (WGS) metaG False
BL_230912 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2012-09-23 Metagenomics (WGS) metaG False
BL_231010 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2010-10-23 Metagenomics (WGS) metaG False
BL_231114 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2014-11-23 Metagenomics (WGS) metaG False
BL_231212 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2012-12-23 Metagenomics (WGS) metaG False
Children Metataxonomies (6 months) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2023 Metataxonomics True SAMN34565804 to SAMN34565827 https://www.ncbi.nlm.nih.gov/sra
V3V4_16S_Wilson_49 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978933 https://www.ebi.ac.uk/ena/browser/view/ERR15978933
V3V4_16S_Wilson_50 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978934 https://www.ebi.ac.uk/ena/browser/view/ERR15978934
V3V4_16S_Wilson_51 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978935 https://www.ebi.ac.uk/ena/browser/view/ERR15978935
V3V4_16S_Wilson_52 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978936 https://www.ebi.ac.uk/ena/browser/view/ERR15978936
V3V4_16S_Wilson_53 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978937 https://www.ebi.ac.uk/ena/browser/view/ERR15978937
V3V4_16S_Wilson_54 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978938 https://www.ebi.ac.uk/ena/browser/view/ERR15978938
V3V4_16S_Wilson_55 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978939 https://www.ebi.ac.uk/ena/browser/view/ERR15978939
V3V4_16S_Wilson_56 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978940 https://www.ebi.ac.uk/ena/browser/view/ERR15978940
V3V4_16S_Wilson_57 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978941 https://www.ebi.ac.uk/ena/browser/view/ERR15978941
V3V4_16S_Wilson_58 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978942 https://www.ebi.ac.uk/ena/browser/view/ERR15978942
V3V4_16S_Wilson_59 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978943 https://www.ebi.ac.uk/ena/browser/view/ERR15978943
V3V4_16S_Wilson_60 V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Microbial Ecology, Nutrition and Health Human Spain Other Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) 2023 2023-06-01 RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) True ERR15978944 https://www.ebi.ac.uk/ena/browser/view/ERR15978944
BL_220111 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2011-01-22 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220208 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-02-08 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220310 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2010-03-22 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220412 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2012-04-22 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220510 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2010-05-22 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220516 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2016-05-22 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
BL_220614 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2014-06-22 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220705 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-07-05 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_220802 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-08-02 Metagenomics (WGS) metaG False
BL_220913 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2013-09-22 Metagenomics (WGS) metaG False
BL_221011 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2011-10-22 Metagenomics (WGS) metaG False
BL_221108 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-11-08 Metagenomics (WGS) metaG False
BL_221213 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2013-12-22 Metagenomics (WGS) metaG False
rrn_operon_ONT_CeD_1 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777818 https://www.ebi.ac.uk/ena/browser/view/ERR12777818
rrn_operon_ONT_CeD_2 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777815 https://www.ebi.ac.uk/ena/browser/view/ERR12777815
rrn_operon_ONT_CeD_3 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777816 https://www.ebi.ac.uk/ena/browser/view/ERR12777816
rrn_operon_ONT_CeD_4 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777817 https://www.ebi.ac.uk/ena/browser/view/ERR12777817
rrn_operon_ONT_CeD_5 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777819 https://www.ebi.ac.uk/ena/browser/view/ERR12777819
rrn_operon_ONT_CeD_6 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777820 https://www.ebi.ac.uk/ena/browser/view/ERR12777820
V3V4_16S_ratEV_1 V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Rat feces, mesenchymal stem cell-derived extracellular vesicles intervention 2022 2022-02-01 16S rRNA gene V3-V4 region amplicon sequencing (primers 341F/805R), Illumina MiSeq True ERR12397630 https://www.ebi.ac.uk/ena/browser/view/ERR12397630
V3V4_16S_ratEV_2 V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Rat feces, mesenchymal stem cell-derived extracellular vesicles intervention 2022 2022-02-01 16S rRNA gene V3-V4 region amplicon sequencing (primers 341F/805R), Illumina MiSeq True ERR12397631 https://www.ebi.ac.uk/ena/browser/view/ERR12397631