| V3V4_16S_Wilson_52 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978936 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978936 |
| V3V4_16S_Wilson_53 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978937 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978937 |
| V3V4_16S_Wilson_54 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978938 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978938 |
| V3V4_16S_Wilson_55 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978939 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978939 |
| V3V4_16S_Wilson_56 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978940 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978940 |
| V3V4_16S_Wilson_57 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978941 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978941 |
| V3V4_16S_Wilson_58 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978942 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978942 |
| V3V4_16S_Wilson_59 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978943 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978943 |
| V3V4_16S_Wilson_60 |
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Other |
Cultured Akkermansia muciniphila ATCC BAA-835 isolate (reference strain, not patient-derived) |
2023 |
2023-06-01 |
|
RNA-Seq transcriptomics of cultured isolate, Illumina NovaSeq 6000 (not metatranscriptomics - single pure-culture strain, not a community sample) |
|
True |
ERR15978944 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15978944 |
| Children Metataxonomies (6 months) |
Healthy children metataxonomies (IPLA) |
|
MicroHealth |
Human |
Principality of Asturias |
Human gut |
child feces |
2024 |
|
|
Metataxonomics |
|
True |
SAMN38115097 to SAMN38115110 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/sra |
| Children Metataxonomies (1 year) |
Healthy children metataxonomies (IPLA) |
|
MicroHealth |
Human |
Principality of Asturias |
Human gut |
child feces |
2024 |
|
|
Metataxonomics |
|
True |
SAMN41921760 to SAMN41921783 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/sra |
| Malaspina_diversity_1 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490353 |
|
|
|
|
|
|
| Malaspina_diversity_2 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490354 |
|
|
|
|
|
|
| Malaspina_diversity_3 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490355 |
|
|
|
|
|
|
| Malaspina_diversity_4 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490356 |
|
|
|
|
|
|
| Malaspina_diversity_5 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490357 |
|
|
|
|
|
|
| Malaspina_diversity_6 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490358 |
|
|
|
|
|
|
| Malaspina_diversity_7 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490359 |
|
|
|
|
|
|
| Malaspina_diversity_8 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490360 |
|
|
|
|
|
|
| Malaspina_diversity_9 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490361 |
|
|
|
|
|
|
| Malaspina_diversity_10 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490362 |
|
|
|
|
|
|
| Malaspina_diversity_11 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490363 |
|
|
|
|
|
|
| Malaspina_diversity_12 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490364 |
|
|
|
|
|
|
| Malaspina_diversity_13 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490365 |
|
|
|
|
|
|
| Malaspina_diversity_14 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490366 |
|
|
|
|
|
|
| Malaspina_diversity_15 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490367 |
|
|
|
|
|
|
| Malaspina_diversity_16 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490368 |
|
|
|
|
|
|
| Malaspina_diversity_17 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490369 |
|
|
|
|
|
|
| Malaspina_diversity_18 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490370 |
|
|
|
|
|
|
| Malaspina_diversity_19 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490371 |
|
|
|
|
|
|
| Malaspina_diversity_20 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490372 |
|
|
|
|
|
|
| Malaspina_diversity_21 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490373 |
|
|
|
|
|
|
| Malaspina_diversity_22 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490374 |
|
|
|
|
|
|
| Malaspina_diversity_23 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490375 |
|
|
|
|
|
|
| Malaspina_diversity_24 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490376 |
|
|
|
|
|
|
| Malaspina_diversity_25 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490377 |
|
|
|
|
|
|
| Malaspina_diversity_26 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490378 |
|
|
|
|
|
|
| Malaspina_diversity_27 |
Malaspina diversity of deep microbial eukaryotes (ICM) |
Malaspina Expedition |
Ecology of Marine Microbes - LOGLAB |
Aquatic |
Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
|
metaB |
|
True |
SAMEA3490379 |
|
|
|
|
|
|
| Malespina_metagenomes_42 |
Malaspina Expedition 2010 bathypelagic metagenomes (JGI) |
Malaspina Expedition |
|
Aquatic |
North of Cape Verde\; Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMN05422130 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_18 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Atlantic Ocean:North of Cape Verde\; Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687154 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_19 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Atlantic Ocean:South Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687572 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_20 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Atlantic Ocean:East of Recife\; Brazil\; South Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687573 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_21 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Atlantic Ocean:East of Porto Seguro\; South Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687571 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_22 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Atlantic Ocean:South Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687153 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_23 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Atlantic Ocean:South Atlantic Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687575 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_24 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:East of Durban\; South Africa\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687540 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_25 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Indian Ocean:West of Perth\; Australia\; South Indian Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687303 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_26 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Pacific Ocean:South of Fiji\; South Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687576 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_27 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Pacific Ocean:South Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687577 |
|
|
|
|
|
|
| Malaspina_metatranscriptome_28 |
Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) |
Malaspina Expedition |
|
Aquatic |
Pacific Ocean:West of Cabo San Lucas\; Mexico\; North Pacific Ocean |
Marine water |
Opean ocean salt water |
|
|
Metatranscriptomics, RT-PCR |
Transcriptome, RT_PCR |
|
True |
SAMN07687112 |
|
|
|
|
|
|
