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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
V3V4_16S_AXOS_23 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451948 https://www.ebi.ac.uk/ena/browser/view/ERR2451948
V3V4_16S_AXOS_24 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451949 https://www.ebi.ac.uk/ena/browser/view/ERR2451949
V3V4_16S_AXOS_25 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451950 https://www.ebi.ac.uk/ena/browser/view/ERR2451950
V3V4_16S_AXOS_26 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451951 https://www.ebi.ac.uk/ena/browser/view/ERR2451951
V3V4_16S_AXOS_27 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451952 https://www.ebi.ac.uk/ena/browser/view/ERR2451952
V3V4_16S_AXOS_28 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451953 https://www.ebi.ac.uk/ena/browser/view/ERR2451953
V3V4_16S_AXOS_29 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451954 https://www.ebi.ac.uk/ena/browser/view/ERR2451954
V3V4_16S_AXOS_30 V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Microbial Ecology, Nutrition and Health Human Denmark Human gut Human feces, overweight individuals with metabolic syndrome, AXOS (arabinoxylan oligosaccharide) dietary intervention 2014 2014-08-04 Metagenomics (WGS) Shotgun whole-genome metagenomics, Illumina HiSeq 2500, paired-end 2x250bp True ERR2451955 https://www.ebi.ac.uk/ena/browser/view/ERR2451955
BL_020814 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2002 2014-08-02 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
BL_140707 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2014-07-07 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099056;SAMEA121367922;SAMEA121367963
BL_030714 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2003 2014-07-03 16S rRNA gene 16S rRNA gene, metaB True SAMEA6939113;
BL_220614 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2014-06-22 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_140602 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2014-06-02 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099011;SAMEA121367920;SAMEA121367962
BL_190514 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2019 2014-05-19 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099097
Malaspina_surf_pico_18S_123 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2014-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432492
Malaspina_surf_pico_16S_123 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2014-05-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655278
Malaspina_Mesozooplankon_16 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2014-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048050
Malaspina_Mesozooplankon_17 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2014-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048049
Malaspina_Mesozooplankon_18 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2014-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048048
BL_140505 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2014-05-05 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099008;SAMEA121367919;SAMEA121367961
BL_100414 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2010 2014-04-10 16S rRNA gene 16S rRNA gene, metaB True SAMEA6939267;SAMEA6939266;
BL_140407 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2014-04-07 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099054;SAMEA121367960
BL_230314 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2014-03-23 Metagenomics (WGS) metaG False
BL_170314 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2017 2014-03-17 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099069
Eukariotyk_diversity_deepoceap_196 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639575
Eukariotyk_diversity_deepoceap_197 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639860
Eukariotyk_diversity_deepoceap_198 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639576
Eukariotyk_diversity_deepoceap_199 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639861
Eukariotyk_diversity_deepoceap_200 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639577
Eukariotyk_diversity_deepoceap_201 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639862
Eukariotyk_diversity_deepoceap_202 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639578
Eukariotyk_diversity_deepoceap_203 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639863
Eukariotyk_diversity_deepoceap_204 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639579
Eukariotyk_diversity_deepoceap_205 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639864
Eukariotyk_diversity_deepoceap_206 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639580
Eukariotyk_diversity_deepoceap_207 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639865
Eukariotyk_diversity_deepoceap_612 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640135
Eukariotyk_diversity_deepoceap_613 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640136
Eukariotyk_diversity_deepoceap_614 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2014-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640245
BL_110314 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2011 2014-03-11 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939289;SAMEA6939288;SAMEA104443886;SAMEA14099070
BL_120214 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2012 2014-02-12 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA6939311;SAMEA6939310;SAMEA104443897;SAMEA14099119
Malaspina_surf_pico_18S_12 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2014-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432443
Malaspina_surf_pico_16S_12 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2014-02-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655229
Eukariotyk_diversity_deepoceap_288 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2015 2014-01-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639631
Eukariotyk_diversity_deepoceap_289 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2015 2014-01-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639916
BL_140114 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2014-01-14 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099052;SAMEA121367916;SAMEA121367957
BL_020114 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2002 2014-01-02 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
BL_221213 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2013-12-22 Metagenomics (WGS) metaG False
BL_161213 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2013-12-16 Metagenomics (WGS) WGS (shotgun), metaG True SAMEA14099104
BL_051213 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2005 2013-12-05 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True SAMEA6939163;SAMEA6939162;SAMEA104443729;SAMEA104443730;SAMEA104443728