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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
rrn_operon_ONT_COVID_104 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424467 https://www.ebi.ac.uk/ena/browser/view/ERR17424467
rrn_operon_ONT_COVID_105 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424468 https://www.ebi.ac.uk/ena/browser/view/ERR17424468
rrn_operon_ONT_COVID_106 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424469 https://www.ebi.ac.uk/ena/browser/view/ERR17424469
rrn_operon_ONT_COVID_107 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424471 https://www.ebi.ac.uk/ena/browser/view/ERR17424471
rrn_operon_ONT_COVID_108 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424472 https://www.ebi.ac.uk/ena/browser/view/ERR17424472
rrn_operon_ONT_COVID_109 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424473 https://www.ebi.ac.uk/ena/browser/view/ERR17424473
rrn_operon_ONT_COVID_110 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424474 https://www.ebi.ac.uk/ena/browser/view/ERR17424474
rrn_operon_ONT_COVID_111 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424475 https://www.ebi.ac.uk/ena/browser/view/ERR17424475
rrn_operon_ONT_COVID_112 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424476 https://www.ebi.ac.uk/ena/browser/view/ERR17424476
rrn_operon_ONT_COVID_113 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424477 https://www.ebi.ac.uk/ena/browser/view/ERR17424477
rrn_operon_ONT_COVID_114 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424373 https://www.ebi.ac.uk/ena/browser/view/ERR17424373
rrn_operon_ONT_COVID_115 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424394 https://www.ebi.ac.uk/ena/browser/view/ERR17424394
rrn_operon_ONT_COVID_116 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424431 https://www.ebi.ac.uk/ena/browser/view/ERR17424431
rrn_operon_ONT_COVID_117 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424433 https://www.ebi.ac.uk/ena/browser/view/ERR17424433
rrn_operon_ONT_COVID_118 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424454 https://www.ebi.ac.uk/ena/browser/view/ERR17424454
rrn_operon_ONT_COVID_119 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424470 https://www.ebi.ac.uk/ena/browser/view/ERR17424470
Malaspina_bathypelagic_viral_7 Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) Malaspina Expedition Aquatic Mediterranean Sea Marine water Opean ocean salt water 2020-08-15 Metagenomics (WGS) WGS (shotgun) True SAMN06266133
Eukariotyk_diversity_deepoceap_335 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639946
Eukariotyk_diversity_deepoceap_336 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639661
Eukariotyk_diversity_deepoceap_337 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639947
Eukariotyk_diversity_deepoceap_338 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639662
Eukariotyk_diversity_deepoceap_339 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639948
Eukariotyk_diversity_deepoceap_679 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640170
Eukariotyk_diversity_deepoceap_680 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640285
Eukariotyk_diversity_deepoceap_681 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640171
Eukariotyk_diversity_deepoceap_682 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640286
Eukariotyk_diversity_deepoceap_683 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640172
Eukariotyk_diversity_deepoceap_684 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2020-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640287
BL_200804 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2020 2020-08-04 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099132
Stye_plic_SAMN37904230 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904230 4643.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904231 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904231 5265.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904232 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904232 5136.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904233 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904233 53.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904234 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904234 4959.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904235 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904235 5338.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904236 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904236 5101.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904237 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904237 5397.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904238 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904238 5173.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904239 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904239 53.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904616 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904616 51.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904617 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904617 5086.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904618 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-07-17 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904618 5082.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904299 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904299 5266.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904300 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904300 5371.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904301 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904301 5175.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904302 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904302 5255.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904303 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904303 5085.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904304 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904304 5322.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904305 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904305 5136.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904306 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-07-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904306 5347.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/