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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
V3V4_16S_mousePhasco_21 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055708 https://www.ebi.ac.uk/ena/browser/view/ERR12055708
V3V4_16S_mousePhasco_22 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055721 https://www.ebi.ac.uk/ena/browser/view/ERR12055721
V3V4_16S_mousePhasco_23 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055699 https://www.ebi.ac.uk/ena/browser/view/ERR12055699
V3V4_16S_mousePhasco_24 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055703 https://www.ebi.ac.uk/ena/browser/view/ERR12055703
V3V4_16S_mousePhasco_25 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055713 https://www.ebi.ac.uk/ena/browser/view/ERR12055713
V3V4_16S_mousePhasco_26 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055714 https://www.ebi.ac.uk/ena/browser/view/ERR12055714
V3V4_16S_mousePhasco_27 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055717 https://www.ebi.ac.uk/ena/browser/view/ERR12055717
V3V4_16S_mousePhasco_28 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055719 https://www.ebi.ac.uk/ena/browser/view/ERR12055719
V3V4_16S_mousePhasco_29 V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, obese mice on high-fat/high-sugar diet + oral Phascolarctobacterium faecium DSM 32890 2019 2019-11-11 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR12055697 https://www.ebi.ac.uk/ena/browser/view/ERR12055697
Intestinal_barrier_1 Metataxonomies Microbial metabolism and intestinal barrier Healthy individuals (adults) and nutritional interventions Microbioma, AlimentaciΓ³n y Salud (BEA) Human Madrid Human gut, Clinical / Hospital adult feces, Patients and controls 2021 Metataxonomics True PRJNA731070 https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA731070
Fermented milk Metagenome Food metagenomes (IPLA) MicroHealth Food Antioquia; Colombia Food / Fermented artisanal suero costeΓ±o 2016 Metagenomics (WGS) Metagenomics True SRX2209117 to SRX2209122 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (6 months) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2024 Metataxonomics True SAMN38115097 to SAMN38115110 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (4-14 years) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2021 Metataxonomics True SAMN40261256 - SAMN40261275 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (<2 years) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2021 Metataxonomics True SAMN32161911 - SAMN32161919 and SAMN32320403 - SAMN32320411 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (6 months) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2023 Metataxonomics True SAMN34565804 to SAMN34565827 https://www.ncbi.nlm.nih.gov/sra
Children Metataxonomies (1 year) Healthy children metataxonomies (IPLA) MicroHealth Human Principality of Asturias Human gut child feces 2024 Metataxonomics True SAMN41921760 to SAMN41921783 https://www.ncbi.nlm.nih.gov/sra
Adult Metagenome Human adult metagenomes (IPLA) MicroHealth Human Principality of Asturias Human other bile samples of liver donors 2019 Metagenomics (WGS) Metagenomics True SRR6877525 to SRR6877527 https://www.ncbi.nlm.nih.gov/sra
Dvex_Alab1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal USA: Alaska Animal other Didemnum vexillum, tunic tissue, Alaska 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239548 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Alab2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal USA: Alaska Animal other Didemnum vexillum, tunic tissue, Alaska 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239549 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Alab3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal USA: Alaska Animal other Didemnum vexillum, tunic tissue, Alaska 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239550 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Alab4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal USA: Alaska Animal other Didemnum vexillum, tunic tissue, Alaska 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239551 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Alab5 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal USA: Alaska Animal other Didemnum vexillum, tunic tissue, Alaska 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239552 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Aomb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Japan: Aomori Animal other Didemnum vexillum, tunic tissue, Aomori 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239519 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Aomb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Japan: Aomori Animal other Didemnum vexillum, tunic tissue, Aomori 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239520 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Aomb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Japan: Aomori Animal other Didemnum vexillum, tunic tissue, Aomori 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239521 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Aomb4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Japan: Aomori Animal other Didemnum vexillum, tunic tissue, Aomori 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239522 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Aomb5 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Japan: Aomori Animal other Didemnum vexillum, tunic tissue, Aomori 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239523 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_B1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Marine water Seawater surface (1L), Ebro Delta (Spain) 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239573 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_B2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Marine water Seawater surface (1L), Ebro Delta (Spain) 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239574 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_B3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Marine water Seawater surface (1L), Ebro Delta (Spain) 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239575 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Breb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Brest Animal other Didemnum vexillum, tunic tissue, Brest 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239509 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Breb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Brest Animal other Didemnum vexillum, tunic tissue, Brest 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239510 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Breb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Brest Animal other Didemnum vexillum, tunic tissue, Brest 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239511 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Breb4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Brest Animal other Didemnum vexillum, tunic tissue, Brest 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239512 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Breb5 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Brest Animal other Didemnum vexillum, tunic tissue, Brest 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239513 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Delb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Animal other Didemnum vexillum, tunic tissue, Ebro Delta 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239538 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Delb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Animal other Didemnum vexillum, tunic tissue, Ebro Delta 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239539 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Delb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Animal other Didemnum vexillum, tunic tissue, Ebro Delta 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239540 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Delb4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Animal other Didemnum vexillum, tunic tissue, Ebro Delta 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239541 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Delb5 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal Spain: Ebro Delta Animal other Didemnum vexillum, tunic tissue, Ebro Delta 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239542 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Nzb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal New Zealand: Nelson Animal other Didemnum vexillum, tunic tissue, Nelson 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239533 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Nzb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal New Zealand: Nelson Animal other Didemnum vexillum, tunic tissue, Nelson 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239534 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Nzb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal New Zealand: Nelson Animal other Didemnum vexillum, tunic tissue, Nelson 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239535 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Nzb4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal New Zealand: Nelson Animal other Didemnum vexillum, tunic tissue, Nelson 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239536 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Nzb5 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal New Zealand: Nelson Animal other Didemnum vexillum, tunic tissue, Nelson 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239537 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Porb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal United Kingdom: Portsmouth Animal other Didemnum vexillum, tunic tissue, Portsmouth 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239543 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Porb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal United Kingdom: Portsmouth Animal other Didemnum vexillum, tunic tissue, Portsmouth 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239544 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Porb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal United Kingdom: Portsmouth Animal other Didemnum vexillum, tunic tissue, Portsmouth 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239545 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Porb4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal United Kingdom: Portsmouth Animal other Didemnum vexillum, tunic tissue, Portsmouth 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239546 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Porb5 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal United Kingdom: Portsmouth Animal other Didemnum vexillum, tunic tissue, Portsmouth 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239547 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/