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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
Stye_plic_SAMN37904324 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904324 5374.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904325 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904325 487.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904326 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904326 4894.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904327 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904327 5322.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904643 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904643 5163.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904644 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904644 5142.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904645 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-01-19 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904645 5099.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Malaspina_surf_pico_18S_47 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2021-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432429
Malaspina_surf_pico_16S_47 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2021-01-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655215
Malaspina_Mesozooplankon_130 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2021-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38047983
Malaspina_Mesozooplankon_141 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2021-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38047983
Malaspina_air_11 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2021-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04903971
Eukariotyk_diversity_deepoceap_253 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639608
Eukariotyk_diversity_deepoceap_254 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639893
Eukariotyk_diversity_deepoceap_255 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639609
Eukariotyk_diversity_deepoceap_256 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639894
Eukariotyk_diversity_deepoceap_634 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640253
Eukariotyk_diversity_deepoceap_635 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640254
BL_131220 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO RNA_extraction (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2013 2020-12-13 Metatranscriptomics metaT True SAMEA121230414
Malaspina_surf_pico_18S_105 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2020-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432410
Malaspina_surf_pico_16S_105 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2020-12-10 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655196
Stye_plic_SAMN37904240 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904240 4631.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904241 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904241 517.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904242 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904242 5187.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904243 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904243 5211.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904244 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904244 5033.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904245 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904245 5307.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904246 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904246 5151.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904247 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904247 5217.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904248 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904248 5045.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904249 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904249 5156.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904619 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904619 5035.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904620 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904620 509.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904621 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904621 508.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904309 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904309 4977.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904310 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904310 5254.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904311 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904311 4983.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904312 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904312 515.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904313 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904313 5067.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904314 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904314 5125.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904315 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904315 5175.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904316 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904316 5026.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904317 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904317 4994.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904318 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904318 4968.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904640 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904640 505.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904641 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904641 5016.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904642 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904642 5052.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
rrn_operon_ONT_COVID_1 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945913 https://www.ebi.ac.uk/ena/browser/view/ERR15945913
rrn_operon_ONT_COVID_2 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945914 https://www.ebi.ac.uk/ena/browser/view/ERR15945914
rrn_operon_ONT_COVID_3 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR15945915 https://www.ebi.ac.uk/ena/browser/view/ERR15945915