Contacto
CSIC Microbioma Hub

Datos Γ“micos

Limpiar
Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
Malaspina_surf_pico_16S_46 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655216
Malaspina_18S(V9)_rRNA_13 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505923
Malaspina_18S(V9)_rRNA_14 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505924
Malaspina_18S(V9)_rRNA_15 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505925
Malaspina_18S(V9)_rRNA_16 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505926
Malaspina_18S(V9)_rRNA_17 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505927
Malaspina_18S(V9)_rRNA_18 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505928
Malaspina_18S(V9)_rRNA_19 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-01-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505929
Malaspina_air_12 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2022-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04903972
BL_121221 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2012 2021-12-12 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True
Malaspina_surf_pico_18S_103 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2021-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432411
Malaspina_surf_pico_16S_103 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2021-12-10 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655197
Malaspina_Mesozooplankon_181 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2021-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMN38047960
Malaspina_Mesozooplankon_195 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2021-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMN38047960
BL_211109 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2021 2021-11-09 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) metaG, metaT, SAG False
Stye_plic_SAMN37904348 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904348 5139.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904349 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904349 5323.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904350 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904350 5027.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904351 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904351 535.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904352 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904352 5132.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904353 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904353 5332.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904354 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904354 5272.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904355 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904355 5099.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904356 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904356 5283.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904357 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904357 5275.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904652 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904652 492.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904653 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904653 4885.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904654 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2021 2021-10-28 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904654 4962.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904279 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904279 5039.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904280 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904280 5264.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904281 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904281 5155.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904282 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904282 5363.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904283 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904283 5152.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904284 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904284 5308.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904285 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904285 5085.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904286 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904286 5113.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904287 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904287 51.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904288 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904288 5189.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904631 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904631 495.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904632 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904632 499.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904633 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2021 2021-10-26 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904633 4988.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
BL_031021 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2003 2021-10-03 16S rRNA gene 16S rRNA gene, metaB True SAMEA6939116;
Stye_plic_SAMN37904338 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904338 5225.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904339 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904339 53.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904340 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904340 525.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904341 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904341 525.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904342 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904342 5232.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904343 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904343 4773.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904344 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904344 5235.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904345 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2021 2021-07-21 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp 1 True SAMN37904345 5285.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/