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Nombre Colección Proyecto Grupo Bioma Localización Origen Fuente específica Año Fecha Tipo ómico Especificaciones ómicas Nº de muestras Público Accession ID Completitud Contaminación Contenido GC N50 Taxonomía Enlace
Malaspina_Mesozooplankon_194 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2022-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMN38047961
BL_091222 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2009 2022-12-09 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939259;SAMEA6939258;SAMEA104443862;SAMEA104443863;SAMEA104443861;SAMEA14099033
BL_221108 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-11-08 Metagenomics (WGS) metaG False
Malaspina_bathypelagic_viral_8 Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) Malaspina Expedition Aquatic Mediterranean Sea Marine water Opean ocean salt water 2022-08-15 Metagenomics (WGS) WGS (shotgun) True SAMN06264750
BL_220802 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-08-02 Metagenomics (WGS) metaG False
Eukariotyk_diversity_deepoceap_537 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic South Atlantic Ocean Sediment deep marine sediment 2009 2022-07-09 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639781
Eukariotyk_diversity_deepoceap_538 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic South Atlantic Ocean Sediment deep marine sediment 2009 2022-07-09 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640068
Eukariotyk_diversity_deepoceap_758 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic South Atlantic Ocean Sediment deep marine sediment 2009 2022-07-09 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640210
BL_220705 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2022-07-05 Metagenomics (WGS), Single-cell genome (SAG) metaG, SAG False
BL_150622 BBMO temporal series (BBMO_ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2015 2022-06-15 16S rRNA gene, 18S rRNA gene 16S rRNA gene, 18S rRNA gene, metaB True SAMEA121230434
Malaspina_surf_pico_18S_86 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-06-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432515
Malaspina_surf_pico_16S_86 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2022-06-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655301
Malaspina_air_83 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2022-06-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04904036
BL_100622 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2010 2022-06-10 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939271;SAMEA6939270;SAMEA104443877;SAMEA14099050
Malaspina_surf_pico_18S_91 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2022-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432499
Malaspina_surf_pico_16S_91 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2022-05-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655285
Malespina_pyrotags_28 Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2022-05-11 metaB True SAMN05425682
BL_020522 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2002 2022-05-02 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
Eukariotyk_diversity_deepoceap_432 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2022-04-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639716
Eukariotyk_diversity_deepoceap_433 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2022-04-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640001
Malaspina_surf_pico_18S_53 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2022-04-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432480
Malaspina_surf_pico_16S_53 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2022-04-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655266
Malaspina_air_59 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2022-04-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04904014
BL_030422 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2003 2022-04-03 16S rRNA gene 16S rRNA gene, metaB True SAMEA6939110;
rrn_operon_ONT_CeD_1 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777818 https://www.ebi.ac.uk/ena/browser/view/ERR12777818
rrn_operon_ONT_CeD_2 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777815 https://www.ebi.ac.uk/ena/browser/view/ERR12777815
rrn_operon_ONT_CeD_3 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777816 https://www.ebi.ac.uk/ena/browser/view/ERR12777816
rrn_operon_ONT_CeD_4 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777817 https://www.ebi.ac.uk/ena/browser/view/ERR12777817
rrn_operon_ONT_CeD_5 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777819 https://www.ebi.ac.uk/ena/browser/view/ERR12777819
rrn_operon_ONT_CeD_6 rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Microbial Ecology, Nutrition and Health Human Portugal Human gut Human feces, coeliac disease patients and first-degree non-coeliac relatives 2022 2022-04-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR12777820 https://www.ebi.ac.uk/ena/browser/view/ERR12777820
Malaspina_surf_pico_18S_4 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2022-03-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432470
Malaspina_surf_pico_16S_4 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2022-03-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655256
Malaspina_air_50 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2022-03-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04904006
BL_100322 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2010 2022-03-10 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939265;SAMEA6939264;SAMEA104443871;SAMEA104443872;SAMEA104443870;SAMEA14099043
BL_040322 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2004 2022-03-04 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True SAMEA6939123;SAMEA104443671
Eukariotyk_diversity_deepoceap_47 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639686
Eukariotyk_diversity_deepoceap_48 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639972
Eukariotyk_diversity_deepoceap_49 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639983
Eukariotyk_diversity_deepoceap_50 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639709
Eukariotyk_diversity_deepoceap_51 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639994
Eukariotyk_diversity_deepoceap_52 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639720
Eukariotyk_diversity_deepoceap_53 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640005
Eukariotyk_diversity_deepoceap_54 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640016
Eukariotyk_diversity_deepoceap_55 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639744
Eukariotyk_diversity_deepoceap_56 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640028
Eukariotyk_diversity_deepoceap_562 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640189
Eukariotyk_diversity_deepoceap_563 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640194
Eukariotyk_diversity_deepoceap_564 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640310
Eukariotyk_diversity_deepoceap_565 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640196
Eukariotyk_diversity_deepoceap_566 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2022-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640199