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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
rrn_operon_ONT_COVID_104 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424467 https://www.ebi.ac.uk/ena/browser/view/ERR17424467
rrn_operon_ONT_COVID_105 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424468 https://www.ebi.ac.uk/ena/browser/view/ERR17424468
rrn_operon_ONT_COVID_106 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424469 https://www.ebi.ac.uk/ena/browser/view/ERR17424469
rrn_operon_ONT_COVID_107 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424471 https://www.ebi.ac.uk/ena/browser/view/ERR17424471
rrn_operon_ONT_COVID_108 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424472 https://www.ebi.ac.uk/ena/browser/view/ERR17424472
rrn_operon_ONT_COVID_109 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424473 https://www.ebi.ac.uk/ena/browser/view/ERR17424473
rrn_operon_ONT_COVID_110 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424474 https://www.ebi.ac.uk/ena/browser/view/ERR17424474
rrn_operon_ONT_COVID_111 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424475 https://www.ebi.ac.uk/ena/browser/view/ERR17424475
rrn_operon_ONT_COVID_112 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424476 https://www.ebi.ac.uk/ena/browser/view/ERR17424476
rrn_operon_ONT_COVID_113 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424477 https://www.ebi.ac.uk/ena/browser/view/ERR17424477
rrn_operon_ONT_COVID_114 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424373 https://www.ebi.ac.uk/ena/browser/view/ERR17424373
rrn_operon_ONT_COVID_115 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424394 https://www.ebi.ac.uk/ena/browser/view/ERR17424394
rrn_operon_ONT_COVID_116 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424431 https://www.ebi.ac.uk/ena/browser/view/ERR17424431
rrn_operon_ONT_COVID_117 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424433 https://www.ebi.ac.uk/ena/browser/view/ERR17424433
rrn_operon_ONT_COVID_118 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424454 https://www.ebi.ac.uk/ena/browser/view/ERR17424454
rrn_operon_ONT_COVID_119 rrn operon ONT sequencing from human feces - COVID patients (IATA) Microbial Ecology, Nutrition and Health Human Spain Human gut Human feces, hospitalised SARS-CoV-2 (COVID-19) patients 2020 2020-10-01 Other Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION True ERR17424470 https://www.ebi.ac.uk/ena/browser/view/ERR17424470
Stye_plic_SAMN37904309 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904309 4977.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904310 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904310 5254.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904311 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904311 4983.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904312 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904312 515.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904313 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904313 5067.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904314 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904314 5125.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904315 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904315 5175.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904316 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904316 5026.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904317 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, gill tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904317 4994.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904318 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova Animal other Styela plicata, tunic tissue, Spain:Vilanova 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904318 4968.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904640 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904640 505.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904641 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904641 5016.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904642 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Vilanova i la Geltru Marine water Seawater control, Spain:Vilanova i la Geltru 2020 2020-10-15 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904642 5052.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904240 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904240 4631.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904241 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904241 517.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904242 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904242 5187.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904243 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904243 5211.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904244 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904244 5033.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904245 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904245 5307.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904246 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904246 5151.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904247 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904247 5217.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904248 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, gill tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904248 5045.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904249 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Animal other Styela plicata, tunic tissue, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904249 5156.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904619 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904619 5035.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904620 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904620 509.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Stye_plic_SAMN37904621 Styela plicata microbiome - spatio-temporal dynamics (CEAB) Molecular ecology of marine benthos Animal Spain:Blanes Marine water Seawater control, Spain:Blanes 2020 2020-10-16 16S rRNA gene V4 region, F515/R806; Illumina NovaSeq 6000; paired-end 150bp True SAMN37904621 508.000 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1030313/
Malaspina_surf_pico_18S_105 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2020-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432410
Malaspina_surf_pico_16S_105 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2020-12-10 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655196
BL_131220 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO RNA_extraction (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2013 2020-12-13 Metatranscriptomics metaT True SAMEA121230414
Eukariotyk_diversity_deepoceap_253 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639608
Eukariotyk_diversity_deepoceap_254 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639893
Eukariotyk_diversity_deepoceap_255 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639609
Eukariotyk_diversity_deepoceap_256 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639894
Eukariotyk_diversity_deepoceap_634 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Mid Atlantic Ocean Sediment deep marine sediment 2014 2020-12-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640253