| Malsespina_Microbial_vertical_75 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646473 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_76 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646473 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_77 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646473 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_78 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646473 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_79 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646473 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_8 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646459 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_80 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_81 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_82 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_83 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_84 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_85 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_86 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_87 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646479 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_88 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646476 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_89 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646476 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_9 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646458 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_90 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646476 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_91 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646476 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_92 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646476 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_93 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646475 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_94 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646475 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_95 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646475 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_96 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646475 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_97 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646475 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_98 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646474 |
|
|
|
|
|
|
| Malsespina_Microbial_vertical_99 |
Malaspina Expedition 2010 Microbial Picoplankton Vertical Profiles Metagenomes (ICM) |
Malaspina Expedition |
|
Aquatic |
[SAO] South Atlantic Ocean (MRGID:1914) |
Marine water |
Opean ocean salt water |
|
|
Metagenomics (WGS) |
WGS (shotgun) |
|
True |
SAMEA110646474 |
|
|
|
|
|
|
| Oral_Intestinal_UlcerativeColitis_1 Metataxonomies |
|
|
|
|
Madrid |
Human gut, Human oral, Clinical / Hospital |
adult feces, Saliva, Patients and controls |
2021 |
|
|
Metataxonomics |
|
True |
PRJNA749643 |
|
|
|
|
|
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA749643/ |
| rrn_operon_ONT_CeD_1 |
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Portugal |
Human gut |
Human feces, coeliac disease patients and first-degree non-coeliac relatives |
2022 |
2022-04-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR12777818 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR12777818 |
| rrn_operon_ONT_CeD_2 |
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Portugal |
Human gut |
Human feces, coeliac disease patients and first-degree non-coeliac relatives |
2022 |
2022-04-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR12777815 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR12777815 |
| rrn_operon_ONT_CeD_3 |
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Portugal |
Human gut |
Human feces, coeliac disease patients and first-degree non-coeliac relatives |
2022 |
2022-04-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR12777816 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR12777816 |
| rrn_operon_ONT_CeD_4 |
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Portugal |
Human gut |
Human feces, coeliac disease patients and first-degree non-coeliac relatives |
2022 |
2022-04-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR12777817 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR12777817 |
| rrn_operon_ONT_CeD_5 |
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Portugal |
Human gut |
Human feces, coeliac disease patients and first-degree non-coeliac relatives |
2022 |
2022-04-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR12777819 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR12777819 |
| rrn_operon_ONT_CeD_6 |
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Portugal |
Human gut |
Human feces, coeliac disease patients and first-degree non-coeliac relatives |
2022 |
2022-04-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR12777820 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR12777820 |
| rrn_operon_ONT_COVID_1 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR15945913 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR15945913 |
| rrn_operon_ONT_COVID_10 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424368 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424368 |
| rrn_operon_ONT_COVID_100 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424463 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424463 |
| rrn_operon_ONT_COVID_101 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424464 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424464 |
| rrn_operon_ONT_COVID_102 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424465 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424465 |
| rrn_operon_ONT_COVID_103 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424466 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424466 |
| rrn_operon_ONT_COVID_104 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424467 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424467 |
| rrn_operon_ONT_COVID_105 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424468 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424468 |
| rrn_operon_ONT_COVID_106 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424469 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424469 |
| rrn_operon_ONT_COVID_107 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424471 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424471 |
| rrn_operon_ONT_COVID_108 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424472 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424472 |
| rrn_operon_ONT_COVID_109 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424473 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424473 |
| rrn_operon_ONT_COVID_11 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424369 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424369 |
| rrn_operon_ONT_COVID_110 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424474 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424474 |
| rrn_operon_ONT_COVID_111 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424475 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424475 |
| rrn_operon_ONT_COVID_112 |
rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Microbial Ecology, Nutrition and Health |
Human |
Spain |
Human gut |
Human feces, hospitalised SARS-CoV-2 (COVID-19) patients |
2020 |
2020-10-01 |
Other |
Full-length rrn operon (16S-ITS-23S) amplicon sequencing, Oxford Nanopore MinION |
|
True |
ERR17424476 |
|
|
|
|
|
https://www.ebi.ac.uk/ena/browser/view/ERR17424476 |
