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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
Malaspina_Mesozooplankon_100 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Indian Ocean Marine water Opean ocean salt water 2019-03-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048016
BL_010419 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2001 2019-04-01 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
BL_040419 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2004 2019-04-04 16S rRNA gene, 18S rRNA gene, Metagenomics (WGS) 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939125;SAMEA6939124;SAMEA104443673;SAMEA104443674;SAMEA104443672
Malaspina_surf_pico_18S_113 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2019-04-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432478
Malaspina_surf_pico_16S_113 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2019-04-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655264
Malespina_metagenomes_21 Malaspina Expedition 2010 bathypelagic metagenomes (JGI) Malaspina Expedition Aquatic South of Fiji\; South Pacific Ocean Marine water Opean ocean salt water 2011 2019-04-11 Metagenomics (WGS) WGS (shotgun) True SAMN05422189
Malespina_metagenomes_51 Malaspina Expedition 2010 bathypelagic metagenomes (JGI) Malaspina Expedition Aquatic South of Fiji\; South Pacific Ocean Marine water Opean ocean salt water 2011 2019-04-11 Metagenomics (WGS) WGS (shotgun) True SAMN05421703
Malespina_pyrotags_21 Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2019-04-11 metaB True SAMN05425662
Malaspina_metatranscriptome_12 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2019-04-11 Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN06268831
Malaspina_air_55 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2019-04-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04904011
Eukariotyk_diversity_deepoceap_430 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2019-04-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639715
Eukariotyk_diversity_deepoceap_431 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2019-04-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640000
Malaspina_surf_pico_18S_96 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2019-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432496
Malaspina_surf_pico_16S_96 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2019-05-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655282
Malaspina_Mesozooplankon_14 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2019-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048052
Malaspina_Mesozooplankon_15 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2019-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048051
BL_200519 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2020 2019-05-20 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene True
Eukariotyk_diversity_deepoceap_531 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Atlantic Ocean Sediment deep marine sediment 2014 2019-06-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639777
Eukariotyk_diversity_deepoceap_532 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Atlantic Ocean Sediment deep marine sediment 2014 2019-06-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640063
Eukariotyk_diversity_deepoceap_533 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Atlantic Ocean Sediment deep marine sediment 2014 2019-06-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639778
Eukariotyk_diversity_deepoceap_534 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Atlantic Ocean Sediment deep marine sediment 2014 2019-06-14 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640065
BL_040719 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2004 2019-07-04 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True SAMEA6939131;SAMEA6939130;SAMEA104443683;SAMEA104443684;SAMEA104443682
BL_190709 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2019 2019-07-09 Metagenomics (WGS), Single-cell genome (SAG) WGS (shotgun), metaG, SAG True SAMEA14099102
BL_190805 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2019 2019-08-05 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099103
BL_041019 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2004 2019-10-04 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True SAMEA6939137;SAMEA6939136;SAMEA104443692;SAMEA104443693;SAMEA104443691
V3V4_16S_mouseSynbiotic_1 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031150 https://www.ebi.ac.uk/ena/browser/view/ERR4031150
V3V4_16S_mouseSynbiotic_2 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031151 https://www.ebi.ac.uk/ena/browser/view/ERR4031151
V3V4_16S_mouseSynbiotic_3 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031152 https://www.ebi.ac.uk/ena/browser/view/ERR4031152
V3V4_16S_mouseSynbiotic_4 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031153 https://www.ebi.ac.uk/ena/browser/view/ERR4031153
V3V4_16S_mouseSynbiotic_5 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031154 https://www.ebi.ac.uk/ena/browser/view/ERR4031154
V3V4_16S_mouseSynbiotic_6 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031155 https://www.ebi.ac.uk/ena/browser/view/ERR4031155
V3V4_16S_mouseSynbiotic_7 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031156 https://www.ebi.ac.uk/ena/browser/view/ERR4031156
V3V4_16S_mouseSynbiotic_8 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031157 https://www.ebi.ac.uk/ena/browser/view/ERR4031157
V3V4_16S_mouseSynbiotic_9 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031158 https://www.ebi.ac.uk/ena/browser/view/ERR4031158
V3V4_16S_mouseSynbiotic_10 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031159 https://www.ebi.ac.uk/ena/browser/view/ERR4031159
V3V4_16S_mouseSynbiotic_11 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031160 https://www.ebi.ac.uk/ena/browser/view/ERR4031160
V3V4_16S_mouseSynbiotic_12 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031161 https://www.ebi.ac.uk/ena/browser/view/ERR4031161
V3V4_16S_mouseSynbiotic_13 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031162 https://www.ebi.ac.uk/ena/browser/view/ERR4031162
V3V4_16S_mouseSynbiotic_14 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031163 https://www.ebi.ac.uk/ena/browser/view/ERR4031163
V3V4_16S_mouseSynbiotic_15 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031164 https://www.ebi.ac.uk/ena/browser/view/ERR4031164
V3V4_16S_mouseSynbiotic_16 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031165 https://www.ebi.ac.uk/ena/browser/view/ERR4031165
V3V4_16S_mouseSynbiotic_17 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031166 https://www.ebi.ac.uk/ena/browser/view/ERR4031166
V3V4_16S_mouseSynbiotic_18 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031167 https://www.ebi.ac.uk/ena/browser/view/ERR4031167
V3V4_16S_mouseSynbiotic_19 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031168 https://www.ebi.ac.uk/ena/browser/view/ERR4031168
V3V4_16S_mouseSynbiotic_20 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031169 https://www.ebi.ac.uk/ena/browser/view/ERR4031169
V3V4_16S_mouseSynbiotic_21 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031170 https://www.ebi.ac.uk/ena/browser/view/ERR4031170
V3V4_16S_mouseSynbiotic_22 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031171 https://www.ebi.ac.uk/ena/browser/view/ERR4031171
V3V4_16S_mouseSynbiotic_23 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031172 https://www.ebi.ac.uk/ena/browser/view/ERR4031172
V3V4_16S_mouseSynbiotic_24 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031173 https://www.ebi.ac.uk/ena/browser/view/ERR4031173
V3V4_16S_mouseSynbiotic_25 V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, synbiotic (Bacteroides uniformis CECT 7771 + wheat bran fibre) treatment against diet-induced obesity 2019 2019-11-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4031174 https://www.ebi.ac.uk/ena/browser/view/ERR4031174