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Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
BL_120518 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2012 2018-05-12 Metagenomics (WGS), 18S rRNA gene WGS (shotgun), 18S rRNA gene, metaB True SAMEA104443900;SAMEA14099126
V3V4_16S_mouseHoldemanella_1 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159942 https://www.ebi.ac.uk/ena/browser/view/ERR4159942
V3V4_16S_mouseHoldemanella_2 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159943 https://www.ebi.ac.uk/ena/browser/view/ERR4159943
V3V4_16S_mouseHoldemanella_3 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159944 https://www.ebi.ac.uk/ena/browser/view/ERR4159944
V3V4_16S_mouseHoldemanella_4 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159945 https://www.ebi.ac.uk/ena/browser/view/ERR4159945
V3V4_16S_mouseHoldemanella_5 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159946 https://www.ebi.ac.uk/ena/browser/view/ERR4159946
V3V4_16S_mouseHoldemanella_6 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159947 https://www.ebi.ac.uk/ena/browser/view/ERR4159947
V3V4_16S_mouseHoldemanella_7 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159948 https://www.ebi.ac.uk/ena/browser/view/ERR4159948
V3V4_16S_mouseHoldemanella_8 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159949 https://www.ebi.ac.uk/ena/browser/view/ERR4159949
V3V4_16S_mouseHoldemanella_9 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159950 https://www.ebi.ac.uk/ena/browser/view/ERR4159950
V3V4_16S_mouseHoldemanella_10 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159951 https://www.ebi.ac.uk/ena/browser/view/ERR4159951
V3V4_16S_mouseHoldemanella_11 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159952 https://www.ebi.ac.uk/ena/browser/view/ERR4159952
V3V4_16S_mouseHoldemanella_12 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159953 https://www.ebi.ac.uk/ena/browser/view/ERR4159953
V3V4_16S_mouseHoldemanella_13 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159954 https://www.ebi.ac.uk/ena/browser/view/ERR4159954
V3V4_16S_mouseHoldemanella_14 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159955 https://www.ebi.ac.uk/ena/browser/view/ERR4159955
V3V4_16S_mouseHoldemanella_15 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159956 https://www.ebi.ac.uk/ena/browser/view/ERR4159956
V3V4_16S_mouseHoldemanella_16 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159957 https://www.ebi.ac.uk/ena/browser/view/ERR4159957
V3V4_16S_mouseHoldemanella_17 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159958 https://www.ebi.ac.uk/ena/browser/view/ERR4159958
V3V4_16S_mouseHoldemanella_18 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159959 https://www.ebi.ac.uk/ena/browser/view/ERR4159959
V3V4_16S_mouseHoldemanella_19 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159960 https://www.ebi.ac.uk/ena/browser/view/ERR4159960
V3V4_16S_mouseHoldemanella_20 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159961 https://www.ebi.ac.uk/ena/browser/view/ERR4159961
V3V4_16S_mouseHoldemanella_21 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159962 https://www.ebi.ac.uk/ena/browser/view/ERR4159962
V3V4_16S_mouseHoldemanella_22 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159963 https://www.ebi.ac.uk/ena/browser/view/ERR4159963
V3V4_16S_mouseHoldemanella_23 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159964 https://www.ebi.ac.uk/ena/browser/view/ERR4159964
V3V4_16S_mouseHoldemanella_24 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159965 https://www.ebi.ac.uk/ena/browser/view/ERR4159965
V3V4_16S_mouseHoldemanella_25 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159966 https://www.ebi.ac.uk/ena/browser/view/ERR4159966
V3V4_16S_mouseHoldemanella_26 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159967 https://www.ebi.ac.uk/ena/browser/view/ERR4159967
V3V4_16S_mouseHoldemanella_27 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159968 https://www.ebi.ac.uk/ena/browser/view/ERR4159968
V3V4_16S_mouseHoldemanella_28 V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Microbial Ecology, Nutrition and Health Animal Spain Animal gut Mouse feces, Holdemanella biformis oral administration, glucose tolerance/GLP-1 signalling 2018 2018-06-01 16S rRNA gene V3-V4 region amplicon sequencing, primers 341F/805R, Illumina MiSeq True ERR4159969 https://www.ebi.ac.uk/ena/browser/view/ERR4159969
BL_180704 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2018 2018-07-04 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099134
BL_180801 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2018 2018-08-01 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099138
BL_181009 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2018 2018-10-09 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099089
BL_161018 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2018-10-16 Metagenomics (WGS), Metatranscriptomics WGS (shotgun), metaG, metaT True SAMEA14099101
BL_181105 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2018 2018-11-05 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099139
Malaspina_surf_pico_18S_49 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2019-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432427
Malaspina_surf_pico_16S_49 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2019-01-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655213
Malaspina_Mesozooplankon_131 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2019-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38047982
Malaspina_Mesozooplankon_142 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2019-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38047982
Malaspina_air_9 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2019-01-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04903969
BL_160119 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2019-01-16 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099079;SAMEA121367940;SAMEA121367980
Malaspina_surf_pico_18S_17 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2019-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432447
Malaspina_surf_pico_16S_17 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2019-02-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655233
Malaspina_air_30 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2019-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04903988
Eukariotyk_diversity_deepoceap_371 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639681
Eukariotyk_diversity_deepoceap_372 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639967
Eukariotyk_diversity_deepoceap_373 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639682
Eukariotyk_diversity_deepoceap_374 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639968
Eukariotyk_diversity_deepoceap_375 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639683
Eukariotyk_diversity_deepoceap_376 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639969
Eukariotyk_diversity_deepoceap_377 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic Southern Ocean Sediment deep marine sediment 2012 2019-02-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639684