Contacto
CSIC Microbioma Hub

Datos Ómicos

Limpiar
Nombre Colección Proyecto Grupo Bioma Localización Origen Fuente específica Año Fecha Tipo ómico Especificaciones ómicas Nº de muestras Público Accession ID Completitud Contaminación Contenido GC N50 Taxonomía Enlace
V3V4_16S_UCI_242 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-06-06 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416865 https://www.ebi.ac.uk/ena/browser/view/ERR3416865
V3V4_16S_UCI_243 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-06-06 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416866 https://www.ebi.ac.uk/ena/browser/view/ERR3416866
V3V4_16S_UCI_244 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-06-06 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416867 https://www.ebi.ac.uk/ena/browser/view/ERR3416867
V3V4_16S_UCI_245 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-26 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416868 https://www.ebi.ac.uk/ena/browser/view/ERR3416868
V3V4_16S_UCI_246 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-01 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416869 https://www.ebi.ac.uk/ena/browser/view/ERR3416869
V3V4_16S_UCI_247 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-09-18 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416870 https://www.ebi.ac.uk/ena/browser/view/ERR3416870
V3V4_16S_UCI_248 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-02 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416871 https://www.ebi.ac.uk/ena/browser/view/ERR3416871
V3V4_16S_UCI_249 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-02 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416872 https://www.ebi.ac.uk/ena/browser/view/ERR3416872
V3V4_16S_UCI_250 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2017 2017-10-02 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416873 https://www.ebi.ac.uk/ena/browser/view/ERR3416873
Malaspina_aerobic_bcateria_41 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Australia: Victoria Marine water Opean ocean salt water 2011 metaB True SAMN19606923
Malaspina_aerobic_bcateria_42 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Australia: Tasmania Marine water Opean ocean salt water 2011 metaB True SAMN19606922
Malaspina_aerobic_bcateria_40 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Australia: Jervis Bay Territory Marine water Opean ocean salt water 2011 metaB True SAMN19606924
Malaspina_aerobic_bcateria_43 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Australia: Great Australian Bight Marine water Opean ocean salt water 2011 metaB True SAMN19606921
Malaspina_metatranscriptome_51 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:West of Santa Cruz de la Palma\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687589
Malaspina_metatranscriptome_33 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:West of Cape Verde\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687490
Malaspina_metatranscriptome_32 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South of Funchal\; North Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687580
Malaspina_metatranscriptome_47 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South of Funchal\; North Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687108
Malaspina_metatranscriptome_34 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South of Cape Verde\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687581
Malaspina_bathypelagic_viral_14 Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Georgia Island Marine water Opean ocean salt water 2025-01-15 Metagenomics (WGS) WGS (shotgun) True SAMN06266143
Malaspina_metatranscriptome_19 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687572
Malaspina_metatranscriptome_22 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687153
Malaspina_metatranscriptome_23 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687575
Malaspina_metatranscriptome_35 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687302
Malaspina_metatranscriptome_37 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687583
Malaspina_metatranscriptome_38 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687110
Malaspina_metatranscriptome_48 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687574
Malaspina_metatranscriptome_31 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:Northeast of Antigua and Barbuda\; North Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687579
Malaspina_metatranscriptome_18 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:North of Cape Verde\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687154
Malaspina_metatranscriptome_20 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Recife\; Brazil\; South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687573
Malaspina_metatranscriptome_36 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Recife\; Brazil\; South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687582
Malaspina_metatranscriptome_21 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Porto Seguro\; South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687571
Malaspina_metatranscriptome_30 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Antigua and Barbuda\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687578
Malaspina_aerobic_bcateria_11 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: Western Tropical Atlantic Province Marine water Opean ocean salt water 2011 metaB True SAMN19606870
Malaspina_aerobic_bcateria_22 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: Western Tropical Atlantic Province Marine water Opean ocean salt water 2010 metaB True SAMN19606869
Malaspina_aerobic_bcateria_33 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: Western Tropical Atlantic Province Marine water Opean ocean salt water 2010 metaB True SAMN19606868
Malaspina_aerobic_bcateria_96 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: Western Tropical Atlantic Province Marine water Opean ocean salt water 2011 metaB True SAMN19606873
Malaspina_aerobic_bcateria_100 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: Western Tropical Atlantic Province Marine water Opean ocean salt water 2011 metaB True SAMN19606872
Malaspina_aerobic_bcateria_111 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: Western Tropical Atlantic Province Marine water Opean ocean salt water 2010 metaB True SAMN19606871
Malaspina_aerobic_bcateria_75 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606892
Malaspina_aerobic_bcateria_76 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606891
Malaspina_aerobic_bcateria_78 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606890
Malaspina_aerobic_bcateria_79 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606889
Malaspina_aerobic_bcateria_80 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606888
Malaspina_aerobic_bcateria_81 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606887
Malaspina_aerobic_bcateria_82 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606886
Malaspina_aerobic_bcateria_83 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606885
Malaspina_aerobic_bcateria_84 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606884
Malaspina_aerobic_bcateria_85 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606883
Malaspina_aerobic_bcateria_86 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606882
Malaspina_aerobic_bcateria_87 Malaspina Amplicon sequences of aerobic anoxygenic photoheterotrophic marine bacteria (ICM) Malaspina Expedition Aquatic Atlantic Ocean: South Atlantic Gyral Province Marine water Opean ocean salt water 2011 metaB True SAMN19606881