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Nombre Colección Proyecto Grupo Bioma Localización Origen Fuente específica Año Fecha Tipo ómico Especificaciones ómicas Nº de muestras Público Accession ID Completitud Contaminación Contenido GC N50 Taxonomía Enlace
V3V4_16S_UCI_95 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2018 2018-01-18 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416718 https://www.ebi.ac.uk/ena/browser/view/ERR3416718
V3V4_16S_UCI_96 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2018 2018-01-18 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416719 https://www.ebi.ac.uk/ena/browser/view/ERR3416719
V3V4_16S_UCI_206 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2018 2018-01-18 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416829 https://www.ebi.ac.uk/ena/browser/view/ERR3416829
V3V4_16S_UCI_156 V3-V4 16S amplicons from human feces - UCI patients (IATA) Microbial Ecology, Nutrition and Health Human Colombia Human gut Human feces, ICU (critically ill) patients with and without sepsis 2018 2018-01-29 16S rRNA gene V3-V4 region amplicon sequencing, Illumina MiSeq True ERR3416779 https://www.ebi.ac.uk/ena/browser/view/ERR3416779
Malaspina_surf_pico_18S_15 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2018-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432446
Malaspina_surf_pico_16S_15 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2018-02-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655232
Malespina_pyrotags_7 Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2018-02-11 metaB True SAMN05425653
Malaspina_air_29 Malaspina air metagenome raw sequence reads (KAUST) Malaspina Expedition Air Air air over the ocean 2011 2018-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMN04903987
Eukariotyk_diversity_deepoceap_13 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639817
Eukariotyk_diversity_deepoceap_14 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640105
Eukariotyk_diversity_deepoceap_15 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639826
Eukariotyk_diversity_deepoceap_16 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640114
Eukariotyk_diversity_deepoceap_17 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639832
Eukariotyk_diversity_deepoceap_18 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640120
Eukariotyk_diversity_deepoceap_19 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639553
Eukariotyk_diversity_deepoceap_20 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639838
Eukariotyk_diversity_deepoceap_21 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639563
Eukariotyk_diversity_deepoceap_22 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639848
Eukariotyk_diversity_deepoceap_23 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639570
Eukariotyk_diversity_deepoceap_24 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639855
Eukariotyk_diversity_deepoceap_548 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640232
Eukariotyk_diversity_deepoceap_549 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640237
Eukariotyk_diversity_deepoceap_550 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640243
Eukariotyk_diversity_deepoceap_551 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-02-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640125
BL_180306 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2018 2018-03-06 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099123
BL_100318 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2010 2018-03-10 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
Malaspina_surf_pico_18S_10 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2018-03-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432465
Malaspina_surf_pico_16S_10 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2018-03-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655251
Eukariotyk_diversity_deepoceap_232 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639595
Eukariotyk_diversity_deepoceap_233 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639880
Eukariotyk_diversity_deepoceap_234 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639596
Eukariotyk_diversity_deepoceap_235 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639881
Eukariotyk_diversity_deepoceap_236 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639882
Eukariotyk_diversity_deepoceap_237 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639598
Eukariotyk_diversity_deepoceap_238 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639883
Eukariotyk_diversity_deepoceap_239 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639599
Eukariotyk_diversity_deepoceap_240 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639884
Eukariotyk_diversity_deepoceap_241 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639600
Eukariotyk_diversity_deepoceap_242 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639885
Eukariotyk_diversity_deepoceap_624 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640246
Eukariotyk_diversity_deepoceap_625 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640147
Eukariotyk_diversity_deepoceap_626 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640247
Eukariotyk_diversity_deepoceap_627 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640148
Eukariotyk_diversity_deepoceap_628 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2015 2018-03-15 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640149
Malaspina_surf_pico_18S_40 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2018-04-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432477
Malaspina_surf_pico_16S_40 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2018-04-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655263
Malespina_metagenomes_1 Malaspina Expedition 2010 bathypelagic metagenomes (JGI) Malaspina Expedition Aquatic South of Fiji\; South Pacific Ocean Marine water Opean ocean salt water 2011 2018-04-11 Metagenomics (WGS) WGS (shotgun) True SAMN05422171
Malespina_metagenomes_14 Malaspina Expedition 2010 bathypelagic metagenomes (JGI) Malaspina Expedition Aquatic South of Fiji\; South Pacific Ocean Marine water Opean ocean salt water 2011 2018-04-11 Metagenomics (WGS) WGS (shotgun) True SAMN05422137
Malespina_pyrotags_20 Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2018-04-11 metaB True SAMN05425661
BL_180508 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2018 2018-05-08 Metagenomics (WGS), Metatranscriptomics, Single-cell genome (SAG) WGS (shotgun), metaG, metaT, SAG True SAMEA14099125