Contacto
CSIC Microbioma Hub

Datos Ómicos

Limpiar
Nombre Colección Proyecto Grupo Bioma Localización Origen Fuente específica Año Fecha Tipo ómico Especificaciones ómicas Nº de muestras Público Accession ID Completitud Contaminación Contenido GC N50 Taxonomía Enlace
Malaspina_metatranscriptome_13 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2011-05-03 Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN06268832
Malaspina_metatranscriptome_14 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2015-05-11 Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN06268833
Malaspina_metatranscriptome_15 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2026-05-11 Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN06268834
Malaspina_metatranscriptome_16 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean Marine water Opean ocean salt water 2011 2011-07-07 Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN06268836
Malaspina_metatranscriptome_17 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Marine water Opean ocean salt water 2015 2015-10-08 Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07631027
EMG_Metagenome_18 EMG produced TPA metagenomics assembly-Malaspina Expedition 2010 Microbial Vertical Profiles Metagenomes (EMG) Malaspina Expedition Aquatic Marine water Opean ocean salt water Metagenomics (WGS) WGS (shotgun) True SAMN07631027
Malaspina_metatranscriptome_47 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South of Funchal\; North Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687108
Malaspina_metatranscriptome_44 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:North Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687109
Malaspina_metatranscriptome_38 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687110
Malaspina_metatranscriptome_29 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:West of El Salvador\; Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687111
Malaspina_metatranscriptome_28 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:West of Cabo San Lucas\; Mexico\; North Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687112
Malaspina_metatranscriptome_22 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687153
Malaspina_metatranscriptome_18 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:North of Cape Verde\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687154
Malaspina_metatranscriptome_35 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687302
Malaspina_metatranscriptome_25 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:West of Perth\; Australia\; South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687303
Malaspina_metatranscriptome_33 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:West of Cape Verde\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687490
Malaspina_metatranscriptome_39 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:East of Madagascar\; South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687492
Malaspina_metatranscriptome_43 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:South Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687493
Malaspina_metatranscriptome_50 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:West of Perth\; Australia\; South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687528
Malaspina_metatranscriptome_24 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:East of Durban\; South Africa\; South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687540
Malaspina_metatranscriptome_45 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:Southwest of Acapulco\; Mexico\; North Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687569
Malaspina_metatranscriptome_21 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Porto Seguro\; South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687571
Malaspina_metatranscriptome_19 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687572
Malaspina_metatranscriptome_20 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Recife\; Brazil\; South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687573
Malaspina_metatranscriptome_48 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687574
Malaspina_metatranscriptome_23 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687575
Malaspina_metatranscriptome_26 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:South of Fiji\; South Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687576
Malaspina_metatranscriptome_27 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:South Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687577
Malaspina_metatranscriptome_30 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Antigua and Barbuda\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687578
Malaspina_metatranscriptome_31 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:Northeast of Antigua and Barbuda\; North Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687579
Malaspina_metatranscriptome_32 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South of Funchal\; North Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687580
Malaspina_metatranscriptome_34 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South of Cape Verde\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687581
Malaspina_metatranscriptome_36 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:East of Recife\; Brazil\; South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687582
Malaspina_metatranscriptome_37 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:South Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687583
Malaspina_metatranscriptome_49 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687584
Malaspina_metatranscriptome_40 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687585
Malaspina_metatranscriptome_41 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Indian Ocean:South of Port of Lincoln\; Great Australian Bight\; South Indian Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687586
Malaspina_metatranscriptome_42 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:South of Fiji\; South Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687587
Malaspina_metatranscriptome_46 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Pacific Ocean:West of El Salvador\; Pacific Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687588
Malaspina_metatranscriptome_51 Malaspina Expedition 2010 bathypelagic metatranscriptomes (JGI) Malaspina Expedition Aquatic Atlantic Ocean:West of Santa Cruz de la Palma\; Atlantic Ocean Marine water Opean ocean salt water Metatranscriptomics, RT-PCR Transcriptome, RT_PCR True SAMN07687589
EMG_Metagenome_17 EMG produced TPA metagenomics assembly-Malaspina Expedition 2010 Microbial Vertical Profiles Metagenomes (EMG) Malaspina Expedition Aquatic Marine water Opean ocean salt water Metagenomics (WGS) WGS (shotgun) True SAMN10280304
Malaspina_DeepMed_2 Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed metagenome (JGI) Malaspina Expedition Aquatic Marine water Opean ocean salt water Metagenomics (WGS) WGS (shotgun) True SAMN10280304
Malaspina_bathypelagic_viral_17 Malaspina Expedition 2010 bathypelagic viral metagenomes (JGI) Malaspina Expedition Aquatic Southern Ocean: Southeast Orkney Island Marine water Opean ocean salt water 2015-01-01 Metagenomics (WGS) WGS (shotgun) True SAMN10280304
Dvex_Rosb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp., tunic tissue, Roscoff 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239504 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Rosb1 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp. n. XT-2020, tunic tissue, France: Roscoff 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp 1 True SAMN14239504 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Rosb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp., tunic tissue, Roscoff 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239505 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Rosb2 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp. n. XT-2020, tunic tissue, France: Roscoff 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp 1 True SAMN14239505 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Rosb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp., tunic tissue, Roscoff 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239506 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Rosb3 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp. n. XT-2020, tunic tissue, France: Roscoff 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp 1 True SAMN14239506 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/
Dvex_Rosb4 Didemnum vexillum microbiome - global survey (CEAB) Molecular ecology of marine benthos Animal France: Roscoff Animal other Didemnum sp., tunic tissue, Roscoff 2020 16S rRNA gene V4 region, F515/R806; Illumina MiSeq; SINGLE-end 500bp True SAMN14239507 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA608680/