Contacto
CSIC Microbioma Hub

Datos Γ“micos

Limpiar
Nombre ColecciΓ³n Proyecto Grupo Bioma LocalizaciΓ³n Origen Fuente especΓ­fica AΓ±o Fecha Tipo Γ³mico Especificaciones Γ³micas NΒΊ de muestras PΓΊblico Accession ID Completitud ContaminaciΓ³n Contenido GC N50 TaxonomΓ­a Enlace
Eukariotyk_diversity_deepoceap_754 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2016 2016-05-09 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640335
Malaspina_surf_pico_18S_99 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2016-05-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432494
Malaspina_surf_pico_16S_99 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2016-05-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655280
Malespina_pyrotags_27 Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Pacific Ocean Marine water Opean ocean salt water 2011 2016-05-11 metaB True SAMN05425665
BL_220516 BBMO temporal series (BBMO_ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2022 2016-05-22 Metagenomics (WGS), Metatranscriptomics, 18S rRNA gene, 16S rRNA gene metaG, metaT, metaB, 18S rRNA gene, 16S rRNA gene False
BL_230516 BBMO temporal series (BBMO_ICM), BBMO MetaGenome nanoplankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2023 2016-05-23 Metagenomics (WGS) metaG False
BL_160607 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2016-06-07 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099055;SAMEA121367945;SAMEA121367985
BL_160705 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2016-07-05 Metagenomics (WGS), Metatranscriptomics WGS (shotgun), metaG, metaT True SAMEA14099084;SAMEA121367946;SAMEA121367986
BL_160802 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2016-08-02 Metagenomics (WGS), Metatranscriptomics WGS (shotgun), metaG, metaT False SAMEA14099100;SAMEA121367947;SAMEA121367987
Eukariotyk_diversity_deepoceap_330 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2016-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10639942
Eukariotyk_diversity_deepoceap_674 Patterns of eukaryotic diversity from the surface to the deep-ocean sediment (Univeristy of Genenva) Malaspina Expedition Aquatic North Pacific Ocean Sediment deep marine sediment 2012 2016-08-12 18S rRNA gene 18S rRNA gene, metaB True SAMEA10640166
BL_030916 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2003 2016-09-03 16S rRNA gene 16S rRNA gene, metaB True SAMEA6939115;
BL_140916 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2016-09-14 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099013;SAMEA121367924;SAMEA121367964
BL_150916 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2015 2016-09-15 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099075;SAMEA121367936;SAMEA121367976
BL_071016 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2007 2016-10-07 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True SAMEA6939207;SAMEA6939206;SAMEA104443787;SAMEA104443786
BL_041116 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2004 2016-11-04 16S rRNA gene, 18S rRNA gene 16S rRNA gene, metaB, 18S rRNA gene True SAMEA6939139;SAMEA6939138;SAMEA104443695;SAMEA104443696;SAMEA104443694
BL_161108 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2016 2016-11-08 Metagenomics (WGS), Metatranscriptomics WGS (shotgun), metaG, metaT True SAMEA14099060
BL_101116 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2010 2016-11-10 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939281;SAMEA6939280;SAMEA104443882;SAMEA14099064
BL_031216 BBMO temporal series (BBMO_ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2003 2016-12-03 16S rRNA gene 16S rRNA gene, metaB True SAMEA6939118;
Malaspina_surf_pico_18S_112 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2016-12-10 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432407
Malaspina_surf_pico_16S_112 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Atlantic Ocean Marine water Opean ocean salt water 2010 2016-12-10 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655193
BL_141216 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2014 2016-12-14 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene, Metatranscriptomics WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG, metaT True SAMEA14099072;SAMEA121367927;SAMEA121367967
BL_100217 BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO surface nanoplankton metagenomes (ICM) BBMO temporal series Ecology of Marine Microbes - LOGLAB Aquatic Western Mediterranean Sea (Blanes Bay) Marine water coastal sea water 2010 2017-02-10 Metagenomics (WGS), 16S rRNA gene, 18S rRNA gene WGS (shotgun), 16S rRNA gene, metaB, 18S rRNA gene, metaG True SAMEA6939263;SAMEA6939262;SAMEA104443868;SAMEA104443869;SAMEA104443867;SAMEA14099041
Malaspina_18S(V4)_rRNA_29 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422520
Malaspina_18S(V4)_rRNA_30 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422526
Malaspina_18S(V4)_rRNA_31 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422525
Malaspina_18S(V4)_rRNA_32 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422524
Malaspina_18S(V4)_rRNA_33 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422523
Malaspina_18S(V4)_rRNA_34 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422522
Malaspina_18S(V4)_rRNA_35 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422521
Malaspina_18S(V4)_rRNA_36 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422609
Malaspina_18S(V4)_rRNA_37 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422615
Malaspina_18S(V4)_rRNA_38 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422614
Malaspina_18S(V4)_rRNA_39 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422613
Malaspina_18S(V4)_rRNA_40 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422612
Malaspina_18S(V4)_rRNA_41 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422611
Malaspina_18S(V4)_rRNA_42 Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA104422610
Malaspina_surf_pico_18S_14 Malaspina surface picoplankton 18S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMEA104432445
Malaspina_surf_pico_16S_14 Malaspina surface picoplankton 16S rRNA gene (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 16S rRNA gene 16S rRNA gene, metaB True SAMEA104655231
Malaspina_18S(V9)_rRNA_6 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505930
Malaspina_18S(V9)_rRNA_7 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505931
Malaspina_18S(V9)_rRNA_8 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505932
Malaspina_18S(V9)_rRNA_9 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505933
Malaspina_18S(V9)_rRNA_10 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505934
Malaspina_18S(V9)_rRNA_11 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505935
Malaspina_18S(V9)_rRNA_12 Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM) Malaspina Expedition Ecology of Marine Microbes - LOGLAB Aquatic Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 18S rRNA gene 18S rRNA gene, 18S rDNA gene, metaB True SAMEA6505936
Malespina_metagenomes_12 Malaspina Expedition 2010 bathypelagic metagenomes (JGI) Malaspina Expedition Aquatic East of Durban\; South Africa\; South Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 Metagenomics (WGS) WGS (shotgun) True SAMN05421563
Malespina_metagenomes_26 Malaspina Expedition 2010 bathypelagic metagenomes (JGI) Malaspina Expedition Aquatic East of Durban\; South Africa\; South Indian Ocean Marine water Opean ocean salt water 2011 2017-02-11 Metagenomics (WGS) WGS (shotgun) True SAMN05422165
Malaspina_Mesozooplankon_39 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Indian Ocean Marine water Opean ocean salt water 2017-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048001
Malaspina_Mesozooplankon_112 Malaspina Mesozooplankon (AZTI) Malaspina Expedition Aquatic Indian Ocean Marine water Opean ocean salt water 2017-02-11 18S rRNA gene 18S rRNA gene, metaB True SAMN38048001