| CGMLab - Comparative Genomics and Metagenomics Lab |
Jaime Huerta Cepas |
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| Microbioma, Alimentación y Salud (BEA) |
M. Victoria Moreno Arribas |
Madrid |
CIAL |
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Human |
Ulcerative Colitis patiens, Healthy individuals (adults) and nutritional interventions, Metabolic syndrome-Cardiovascular disease patients, SARS-CoV-2 patients, Nursing homes residents, Early Alzheimer patients, Infant metagenomes and food contaminants |
Ulcerative Colitis patients-Oral and Intestinal microbiome (CIAL-CSIC, BEA group), Oral microbiome and polyphenols intervention (CIAL-CSIC, BEA group), Polyphenols supplementation effects on human gut microbiome (CIAL-CSIC, BEA group), Inter-individual variability in intestinal polyphenols metabolism (CIAL-CSIC, BEA group), Microbiome-aging, nursing homes, metagenomics, resistome (CIAL-CSIC, BEA group), Intestinal microbiota role in cardiometabolic disorders (CIAL-CSIC, BEA group), Ulcerative Colitis patients - Polyphenols and oral and Intestinal microbiome (CIAL-CSIC, BEA group), Intestinal microbiome SARS-CoV-2 patients, included recurrent PCR+ (CIAL-CSIC, BEA group), Microbial metabolism and intestinal barrier, Alzheimer patients - Microbiome (CIAL-CSIC, BEA Group) |
| EEZ-Mycorrhizal Ecology Lab |
Alvaro López García |
Andalucía |
EEZ |
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Terrestrial |
Arbuscular Mycorrhizal Fungi |
Colección de Hongos Micorrícicos Arbusculares (EEZ) |
| MicroHealth |
Susana Delgado Palacio |
Asturias |
IPLA |
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Human |
Probiotabank |
Lactic acid bacteria (IPLA), Bifidobacteria (IPLA), Streptococcus (IPLA), Healthy children metataxonomies (IPLA), Blautia (IPLA), Clostridia (IPLA), Isolates from the human gastrointestinal tract (IPLA) |
| MicroHealth |
Patricia Ruas Madiedo |
Asturias |
IPLA |
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Human, Food |
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Food metagenomes (IPLA), Bacteria from whey (rennet coagulated milk in the lab) (IPLA), Bacteria from Gamoneu cheese rind (IPLA), Isolates from the human gastrointestinal tract (IPLA) |
| MicroHealth |
Abelardo Margolles Barros |
Asturias |
IPLA |
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Human |
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Human adult metagenomes (IPLA), Isolates from the human gastrointestinal tract (IPLA) |
| MicroHealth |
Lorena Ruiz García |
Asturias |
IPLA |
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Human, Food |
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Bacteria from beer bagasse (BSG) (IPLA), Bacteria from artichoke (IPLA), Yeast from beer bagasse (BSG) (IPLA), Yeast from artichoke (IPLA), Bacteria from apple pomace (IPLA), Yeast from apple pomace (IPLA), Isolates from the human gastrointestinal tract (IPLA) |
| Ecology of Marine Microbes |
Silvia Acinas |
Cataluña |
ICM |
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Aquatic |
MARINHET |
MARINHET_ICM, MARINHET_ICM_ATP09, MARINHET_ICM_BBMO, MARINHET_ICM_MIFASOL, MARINHET_ICM_Malaspina, MARINHET_ICM_Tara |
| Plant Microbiome Collection |
Íñigo Zabalgogeazcoa y Beatriz Rodriguez Vázquez de Aldana |
Castilla y León |
IRNASA |
Hongos endófitos, microbioma, interacción planta-hongo, plantas silvestres |
Laboratorio de microbiología, Servicio de Biología Molecular (RT-PCR, qPCR), Servicio de Análisis e Instrumentación (UHPLC/MS, ICP-OES), Microscopia |
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Plants |
Fungal Microbiome of Plants |
Fungal Microbiome of Festuca rubra subsp. pruinosa, Fungal Microbiome of Celtica gigantea |
| Ecology of Marine Microbes |
Josep Gasol y Olga Sánchez |
Cataluña |
ICM |
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Aquatic |
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MED_ICM, REMEI (ICM), Prokaryotic Gene Catalogs v1 (years 2009–2015) from the Blanes and Banyuls Bay Microbial Observatories (BBMO–SOLA) |
| SabiO-Microbioomics Lab |
Sandra Díaz Sánchez |
Castilla-La Mancha |
IREC |
Hospedador-microbiota, artrópodos vectores, omics |
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Animal |
IMpROVE |
Tick Metataxonomies (5 pooled samples), Tick metataxonomies |
| Tecnología de Productos Lácteos y Cárnicos (Dpto. Tecnología de Alimentos) |
Antonia Picón |
Madrid |
INIA |
Lactic acid bacteria isolated from raw milk cheese in Málaga |
Microbiology lab, Molecular biology lab, physical properties lab |
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Food |
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Lactic acid bacteria Málaga (INIA), Lactic acid bacteria Cádiz (INIA) |
| Littoral Biological Processes - PBL |
Albert Reñé |
Cataluña |
ICM |
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Aquatic |
Understanding top-down control in coastal bloom-forming protist: opening the parasitic compartiment - COPAS, Metabarcoding of benthic coastal sediment from the German Wadden Sea, Resource partitioning by Specialization in marine parasites. SMART, Distribution of chytrids infecting diatoms, Gut microbiome of copepods and cladocerans |
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| Molecular ecology of marine benthos |
Xavier Turon |
Catalonia |
CEAB |
Marine invertebrate microbiome; tunicate and sponge holobiont; invasive species; benthic community metabarcoding; population genetics and phylogeography of benthic invertebrates |
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Aquatic, Animal |
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Didemnum vexillum microbiome - global survey (CEAB), Styela plicata microbiome - multidimensional variability (CEAB), Styela plicata microbiome - spatio-temporal dynamics (CEAB), Didemnum vexillum microbiome - global survey ZOTUs (CEAB) |
| Ecology of Marine Microbes - LOGLAB |
Ramiro Logares |
Cataluña |
ICM |
Ecología microbiana, océano, omics, bioinformática, evolución, comunidades |
Laboratorio para análisis moleculares (PCR, qPCR, etc), laboratorios de filtración, laboratorio de análisis de pigmentos, varios microscopios del servicio de microscopía, cluster HPC para análisis bioinformáticos |
PetriMed (Biodiversa+), Biocean5D (EC), TREC (EMBL) |
Aquatic |
BBMO temporal series, Malaspina Expedition |
BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM), Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM), Malaspina diversity of deep microbial eukaryotes (ICM), Malaspina 16S rDNA size-fractions (ICM), Malaspina surface picoplankton 18S rRNA gene (ICM), Malaspina surface picoplankton 16S rRNA gene (ICM), Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM), Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM), BBMO surface nanoplankton metagenomes (ICM), Metagenomes_assembled_genomes_MAGs_nondereplicated (ICM), Prokaryotic Gene Catalogs v1 (years 2009–2015) from the Blanes and Banyuls Bay Microbial Observatories (BBMO–SOLA) |
