| Ecology of Marine Microbes - LOGLAB |
Ramiro Logares |
CataluΓ±a |
ICM |
EcologΓa microbiana, ocΓ©ano, omics, bioinformΓ‘tica, evoluciΓ³n, comunidades |
Laboratorio para anΓ‘lisis moleculares (PCR, qPCR, etc), laboratorios de filtraciΓ³n, laboratorio de anΓ‘lisis de pigmentos, varios microscopios del servicio de microscopΓa, cluster HPC para anΓ‘lisis bioinformΓ‘ticos |
PetriMed (Biodiversa+), Biocean5D (EC), TREC (EMBL) |
Aquatic |
BBMO temporal series, Malaspina Expedition |
BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO RNA_extraction (ICM), BBMO Viromes (ICM), BBMO SAGs (ICM), Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM), Malaspina diversity of deep microbial eukaryotes (ICM), Malaspina 16S rDNA size-fractions (ICM), Malaspina surface picoplankton 18S rRNA gene (ICM), Malaspina surface picoplankton 16S rRNA gene (ICM), Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM), Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM), BBMO surface nanoplankton metagenomes (ICM), Metagenomes_assembled_genomes_MAGs_nondereplicated (ICM), Prokaryotic Gene Catalogs v1 (years 2009β2015) from the Blanes and Banyuls Bay Microbial Observatories (BBMOβSOLA) |
| Ecology of Marine Microbes |
Silvia Acinas |
CataluΓ±a |
ICM |
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Aquatic |
MARINHET |
MARINHET_ICM, MARINHET_ICM_ATP09, MARINHET_ICM_BBMO, MARINHET_ICM_MIFASOL, MARINHET_ICM_Malaspina, MARINHET_ICM_Tara |
| Littoral Biological Processes - PBL |
Albert ReΓ±Γ© |
CataluΓ±a |
ICM |
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Aquatic |
Understanding top-down control in coastal bloom-forming protist: opening the parasitic compartiment - COPAS, Metabarcoding of benthic coastal sediment from the German Wadden Sea, Resource partitioning by Specialization in marine parasites. SMART, Distribution of chytrids infecting diatoms, Gut microbiome of copepods and cladocerans |
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| Molecular ecology of marine benthos |
Xavier Turon |
Catalonia |
CEAB |
Marine invertebrate microbiome; tunicate and sponge holobiont; invasive species; benthic community metabarcoding; population genetics and phylogeography of benthic invertebrates |
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Aquatic, Animal |
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Didemnum vexillum microbiome - global survey (CEAB), Styela plicata microbiome - multidimensional variability (CEAB), Styela plicata microbiome - spatio-temporal dynamics (CEAB), Didemnum vexillum microbiome - global survey ZOTUs (CEAB) |