| EMM - LOGLAB (ICM) |
Ramiro Logares |
Cataluña |
ICM |
Microbial ecology, ocean, omics, bioinformatics, evolution, communities |
Laboratorio para análisis moleculares (PCR, qPCR, etc), laboratorios de filtración, laboratorio de análisis de pigmentos, varios microscopios del servicio de microscopía, cluster HPC para análisis bioinformáticos |
PetriMed (Biodiversa+), Biocean5D (EC), TREC (EMBL) |
Aquatic |
BBMO temporal series, Malaspina Expedition |
BBMO temporal series (BBMO_ICM), BBMO surface picoplankton metagenomes (ICM), BBMO 16S rRNA gene pico- & nano-plankton (ICM), BBMO 18S rRNA gene pico- & nano-plankton (ICM), BBMO MetaGenome nanoplankton (ICM), BBMO SAGs (ICM), Malaspina global 2010 deep ocean expedition - rRNA pyrotags (ICM), Malaspina diversity of deep microbial eukaryotes (ICM), Malaspina 16S rDNA size-fractions (ICM), Malaspina surface picoplankton 18S rRNA gene (ICM), Malaspina surface picoplankton 16S rRNA gene (ICM), Malaspina picoplankton 18S rRNA-gene sequences (V9 region) from ocean vertical profiles (ICM), Malaspina picoplankton 18S rRNA-gene sequences (V4 region) from ocean vertical profiles (ICM), BBMO surface nanoplankton metagenomes (ICM), Metagenomes_assembled_genomes_MAGs_nondereplicated (ICM), Prokaryotic Gene Catalogs v1 (years 2009–2015) from the Blanes and Banyuls Bay Microbial Observatories (BBMO–SOLA) |
| Ecology of Marine Microbes-PI: S.Acinas (ICM) |
Silvia Acinas |
Cataluña |
ICM |
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Aquatic |
MARINHET |
MARINHET_ICM, MARINHET_ICM_ATP09, MARINHET_ICM_BBMO, MARINHET_ICM_MIFASOL, MARINHET_ICM_Malaspina, MARINHET_ICM_Tara |
| Ecology of Marine Microbes-PI: P.Gasol (ICM) |
Josep Gasol y Olga Sánchez |
Cataluña |
ICM |
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Aquatic |
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MED_ICM, REMEI (ICM), Prokaryotic Gene Catalogs v1 (years 2009–2015) from the Blanes and Banyuls Bay Microbial Observatories (BBMO–SOLA) |
| Littoral Biological Processes - PBL |
Albert Reñé |
Cataluña |
ICM |
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Aquatic |
Understanding top-down control in coastal bloom-forming protist: opening the parasitic compartiment - COPAS, Metabarcoding of benthic coastal sediment from the German Wadden Sea, Resource partitioning by Specialization in marine parasites. SMART, Distribution of chytrids infecting diatoms, Gut microbiome of copepods and cladocerans |
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| Molecular ecology of marine benthos |
Xavier Turon |
Catalonia |
CEAB |
Marine invertebrate microbiome; tunicate and sponge holobiont; invasive species; benthic community metabarcoding; population genetics and phylogeography of benthic invertebrates |
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Aquatic, Animal |
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Didemnum vexillum microbiome - global survey (CEAB), Styela plicata microbiome - multidimensional variability (CEAB), Styela plicata microbiome - spatio-temporal dynamics (CEAB), Didemnum vexillum microbiome - global survey ZOTUs (CEAB) |
| Ecology of the Global Microbiome (CEAB) |
Emilio O. Casamayor |
Catolania |
CEAB |
Microbial ecology, gut microbiota, ecoinformatics, microbial communities |
Laboratory for molecular analyses (PCR, qPCR, etc.), asceptic manipulation and an HPC cluster for bioinformatic analyses |
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Soil, Aquatic, Animal, Plants, Air |
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AIR_MetroBarcelona_16S (CEAB), AIR_MontanaMontseny_16S18S (CEAB), AIR_MontanaMontseny_BacterialAirCore (CEAB), AIR_MontanaMontseny_EukaryalAirCore (CEAB), AIR_MontanaPirineos_16S18S (CEAB), AIR_MontanaSierraNevada_16S (CEAB), AIR_ValleEbro_16S (CEAB), AIR_ValleEbro_Metagenoma (CEAB), AQC_EfluentesDepuradoras_16S (CEAB), AQC_LagosAlpinosNeuston_16S (CEAB), AQC_LagosAlpinos_16S (CEAB), AQC_LagosAlpinos_18S (CEAB), AQC_LagosAlpinos_Cloning16S (CEAB), AQC_LagosAlpinos_Cloning16S_AmoAOTUs (CEAB), AQC_LagosAlpinos_Cloning18S (CEAB), AQC_LagosAlpinos_Metagenoma (CEAB), AQC_LagosAlpinos_Metagenoma_16SOrderTable (CEAB), AQC_LagosAlpinos_Metagenoma_18SOrderTable (CEAB), AQC_LagosAlpinos_Metagenoma_FunctionalGenes (CEAB), AQC_LagosBanyoles_16S (CEAB), AQC_LagosBanyoles_16S_NovelOTUs (CEAB), AQC_LagosBanyoles_18S (CEAB), AQC_LagosBanyoles_DGGE18S (CEAB), AQC_LagosBanyoles_Metagenoma (CEAB), AQC_LagosBanyoles_Metagenoma_TaxFuncTables (CEAB), AQC_LagosHipersalinosChile_DGGE16S (CEAB), AQC_LagosMonegros_16S (CEAB), AQC_LagosMonegros_DGGE16S18S (CEAB), AQC_LagosMonegros_DGGE18S (CEAB), AQC_LagosMonegros_DGGE18S_ClosestMatches (CEAB), AQC_LagosMonegros_Metagenoma (CEAB), AQC_RiosMontseny_16S_2022 (CEAB), AQC_RiosMontseny_16S_2024 (CEAB), GUT_Artemia_DGGE16S (CEAB), GUT_Ciervo_16S (CEAB), GUT_Conejo_16S_2020 (CEAB), GUT_Conejo_16S_2025 (CEAB), GUT_GanadoAntiparasitarios_16S (CEAB), GUT_Jabali_16S (CEAB), GUT_Liebre_16S (CEAB), GUT_LinceIberico_16S (CEAB), GUT_AnelidosArticos_16S (CEAB), PHYL_BosqueEncinasMed_16S (CEAB), PHYL_BosquesHayaPino_16S (CEAB), SOIL_GradienteOrdesa_16S (CEAB), SOIL_MonegrosGallocanta_16S (CEAB), SOIL_RizosferaOlivos_16S (CEAB), SOIL_RizosferaOlivos_16S_ArchaeaAbundance (CEAB), SOIL_RizosferaPlantasRaras_16S (CEAB) |
