| Microbial Ecology, Nutrition and Health |
Alfonso BenΓtez-PΓ‘ez |
Comunitat Valenciana |
IATA-CSIC |
Human gut microbiome research; diet and host-microbiota interactions; clinical and intervention microbiome studies (amplicon, shotgun metagenomics, rrn operon long-read sequencing) |
16S rRNA V3-V4 amplicon sequencing (Illumina); full-length rrn operon (16S-ITS-23S) amplicon sequencing (Oxford Nanopore MinION); shotgun metagenomics (Illumina) |
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Human, Animal |
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rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA), rrn operon ONT sequencing from human feces - COVID patients (IATA), rrn operon ONT sequencing from human feces - FMT (IATA), V3-V4 16S amplicons from human feces - AXOS intervention (IATA), V3-V4 16S amplicons from human feces - UCI patients (IATA), V3-V4 16S amplicons from human feces - newborns with CeD (IATA), V3-V4 16S amplicons from human feces - obese+IR children (IATA), V3-V4 16S amplicons from human feces - Wilson Disease (IATA), V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA), V3-V4 16S amplicons from rats - probiotic safety assay (IATA), Shotgun sequencing from human feces - caloric restriction intervention (IATA), V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA), V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA), V3-V4 - 16S amplicons from mice/probiotic properties 3 (IATA), V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) |
| Ecology of the Global Microbiome (CEAB) |
Emilio O. Casamayor |
Catolania |
CEAB |
Microbial ecology, gut microbiota, ecoinformatics, microbial communities |
Laboratory for molecular analyses (PCR, qPCR, etc.), asceptic manipulation and an HPC cluster for bioinformatic analyses |
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Soil, Aquatic, Animal, Plants, Air |
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AIR_MetroBarcelona_16S (CEAB), AIR_MontanaMontseny_16S18S (CEAB), AIR_MontanaMontseny_BacterialAirCore (CEAB), AIR_MontanaMontseny_EukaryalAirCore (CEAB), AIR_MontanaPirineos_16S18S (CEAB), AIR_MontanaSierraNevada_16S (CEAB), AIR_ValleEbro_16S (CEAB), AIR_ValleEbro_Metagenoma (CEAB), AQC_EfluentesDepuradoras_16S (CEAB), AQC_LagosAlpinosNeuston_16S (CEAB), AQC_LagosAlpinos_16S (CEAB), AQC_LagosAlpinos_18S (CEAB), AQC_LagosAlpinos_Cloning16S (CEAB), AQC_LagosAlpinos_Cloning16S_AmoAOTUs (CEAB), AQC_LagosAlpinos_Cloning18S (CEAB), AQC_LagosAlpinos_Metagenoma (CEAB), AQC_LagosAlpinos_Metagenoma_16SOrderTable (CEAB), AQC_LagosAlpinos_Metagenoma_18SOrderTable (CEAB), AQC_LagosAlpinos_Metagenoma_FunctionalGenes (CEAB), AQC_LagosBanyoles_16S (CEAB), AQC_LagosBanyoles_16S_NovelOTUs (CEAB), AQC_LagosBanyoles_18S (CEAB), AQC_LagosBanyoles_DGGE18S (CEAB), AQC_LagosBanyoles_Metagenoma (CEAB), AQC_LagosBanyoles_Metagenoma_TaxFuncTables (CEAB), AQC_LagosHipersalinosChile_DGGE16S (CEAB), AQC_LagosMonegros_16S (CEAB), AQC_LagosMonegros_DGGE16S18S (CEAB), AQC_LagosMonegros_DGGE18S (CEAB), AQC_LagosMonegros_DGGE18S_ClosestMatches (CEAB), AQC_LagosMonegros_Metagenoma (CEAB), AQC_RiosMontseny_16S_2022 (CEAB), AQC_RiosMontseny_16S_2024 (CEAB), GUT_Artemia_DGGE16S (CEAB), GUT_Ciervo_16S (CEAB), GUT_Conejo_16S_2020 (CEAB), GUT_Conejo_16S_2025 (CEAB), GUT_GanadoAntiparasitarios_16S (CEAB), GUT_Jabali_16S (CEAB), GUT_Liebre_16S (CEAB), GUT_LinceIberico_16S (CEAB), GUT_AnelidosArticos_16S (CEAB), PHYL_BosqueEncinasMed_16S (CEAB), PHYL_BosquesHayaPino_16S (CEAB), SOIL_GradienteOrdesa_16S (CEAB), SOIL_MonegrosGallocanta_16S (CEAB), SOIL_RizosferaOlivos_16S (CEAB), SOIL_RizosferaOlivos_16S_ArchaeaAbundance (CEAB), SOIL_RizosferaPlantasRaras_16S (CEAB) |