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Nombre Notas Biomas Grupos de investigaciΓ³n Proyectos Objeto de estudio Origen del microbioma Fecha inicial Fecha final Cultivo Datos Γ³micos NΒΊ Aislados NΒΊ Metagenomas NΒΊ Muestras AnΓ‘lisis genΓ³mico Repositorio Accession ID Publicaciones
AQC_LagosAlpinos_Metagenoma (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Taxonomy and functional potential (C, N, S and P cycling) of the microbial community in the upper and bottom waters of Lake Redon (Pyrenees). 25/09/2013 25/09/2013 False True 0 2 ENA PRJEB6029 https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosAlpinos_Metagenoma_16SOrderTable (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Order-level taxonomic composition of the prokaryotes (16S rRNA gene reads), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). 25/09/2013 25/09/2013 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosAlpinos_Metagenoma_18SOrderTable (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Order-level taxonomic composition of the eukaryotes (18S rRNA gene reads), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). 25/09/2013 25/09/2013 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosAlpinos_Metagenoma_FunctionalGenes (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Abundance of C, N, S and P cycling marker genes (KEGG), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). 25/09/2013 25/09/2013 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosBanyoles_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Bacterial diversity and novelty in the deep sulfurous waters of three lakes of the Banyoles karstic area. 08/05/2010 08/05/2010 False True 0 18 ENA PRJEB5429 https://doi.org/10.1007/s00248-015-0696-2
AQC_LagosBanyoles_16S_NovelOTUs (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Novel OTUs (highest novelty plot area) derived from the samples of AQC_LagosBanyoles_16S (CEAB). 08/05/2010 08/05/2010 False True 0 Supplementary material (article) No own accession see article DOI https://doi.org/10.1007/s00248-015-0696-2
AQC_LagosBanyoles_18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Protist diversity in the sulfidic waters of the Banyoles karstic lakes, from 454 pyrotag sequencing of six samples. 10/05/2010 10/05/2010 False True 0 455 GenBank LN735563-LN736017 https://doi.org/10.1111/1758-2229.12324
AQC_LagosBanyoles_DGGE18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Protist diversity in sulfurous karstic lakes and coastal lagoons, from DGGE fingerprinting of 40 water samples. 12/07/1989 10/07/2002 False True 0 108 GenBank AJ862378-AJ862487 https://doi.org/10.1111/1758-2229.12324
AQC_LagosBanyoles_Metagenoma (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Taxonomic diversity and functional potential of the microbial community of the sulfurous lakes CisοΏ½ and Banyoles (basin C-III). 08/05/2010 09/05/2010 False True 0 12 CAMERA CAM_P_0001174 https://doi.org/10.1038/ismej.2014.254
AQC_LagosBanyoles_Metagenoma_TaxFuncTables (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Taxonomic composition and functional processes derived from the metagenomes of AQC_LagosBanyoles_Metagenoma (CEAB). 08/05/2010 09/05/2010 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1038/ismej.2014.254
AQC_LagosHipersalinosChile_DGGE16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Free-living bacterial diversity in natural brines and laboratory Artemia cultures of Chilean hypersaline environments. False True 0 46 GenBank LK391422-LK391467 https://doi.org/10.1007/s00792-014-0694-1
AQC_LagosMonegros_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Microbial community assembly along a wide salinity gradient (0.1-40%) in shallow saline ponds of the Monegros Desert. 12/11/2012 30/04/2014 False True 0 274 NCBI SRA PRJNA429605 https://doi.org/10.1038/s41396-019-0454-4
AQC_LagosMonegros_DGGE16S18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Bacterial, archaeal and eukaryal diversity and novelty in saline shallow lakes of the Monegros Desert, in winter and spring. 21/12/2004 25/05/2005 False True 0 80 GenBank AM071495-AM071509, AM072914, AM072916-AM072918, AM072920-AM072921, AM072923, AM072928, AM072930, AM072932-AM072939, AM085949-AM085957, AM085959-AM085962, AM085964, AM085966-AM085969, AM085971, AM085973-AM085974, AM085976-AM085993, AM087460-AM087468 https://doi.org/10.1111/1574-6941.12139
AQC_LagosMonegros_DGGE18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Diversity and novelty of planktonic protists in 34 coastal and inland saline ponds of Spain and Chile. 01/05/1992 30/06/2005 False True 0 114 GenBank AM072914-AM072938, AM084278-AM084326, AM087460-AM087468, AM179805-AM179824, AM231690-AM231700 https://doi.org/10.1111/1574-6941.12095
AQC_LagosMonegros_DGGE18S_ClosestMatches (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Closest environmental and cultured matches (BLAST) derived from the 18S rRNA gene sequences of AQC_LagosMonegros_DGGE18S (CEAB). False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1111/1574-6941.12095
AQC_LagosMonegros_Metagenoma (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Shotgun metagenomes of the microbial communities of three Monegros hypersaline lakes sampled over two years. 13/11/2012 23/12/2014 False False 0 41
AQC_RiosMontseny_16S_2022 (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Effect of organic carbon availability on ammonium uptake and on the microbial community of an intermittent Mediterranean stream (Fuirosos). 28/03/2019 20/02/2020 False True 0 86 NCBI SRA PRJNA881938 https://doi.org/10.1111/fwb.14152
AQC_RiosMontseny_16S_2024 (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Influence of organic matter composition and nutrient ratios on nitrate uptake by microbes in nine Mediterranean streams and wetlands. 19/04/2021 12/05/2021 False True 0 NCBI SRA PRJNA1131982 https://doi.org/10.1029/2024JG008346
GUT_Artemia_DGGE16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut bacteria of wild and laboratory Artemia from Chilean hypersaline sites, compared with the bacteria of the surrounding brine. False True 0 37 GenBank LK391468-LK391504 https://doi.org/10.1007/s00792-014-0694-1
GUT_Ciervo_16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut microbiota of Iberian red deer in relation to physiological stress, reproductive cycle and hunting management in Sierra Morena. 20/10/2020 05/02/2022 False False 0 224
GUT_Conejo_16S_2020 (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut microbiota of wild European rabbits, in the field and in captivity, and its link to host and environmental factors. False True 0 126 NCBI SRA / MGnify SRP129755 https://doi.org/10.1038/s41598-020-80782-4
GUT_Conejo_16S_2025 (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut microbiota of wild European rabbits during haemorrhagic disease outbreaks in Spain and Morocco. 01/11/2019 01/02/2021 False True 0 105 NCBI SRA PRJNA1031537 https://doi.org/10.1016/j.vetmic.2025.110688
GUT_GanadoAntiparasitarios_16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Short-term changes in the microbiota and the greenhouse gas emissions of cattle dung treated with ivermectin (DoοΏ½ana). 17/07/2017 17/07/2017 False True 0 66 NCBI SRA PRJNA515520 https://doi.org/10.1016/j.apsoil.2025.106704
GUT_Jabali_16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut microbiota of wild boar in Spain and its relation to population management. 18/10/2019 01/02/2020 False True 0 88 NCBI SRA PRJNA886492 https://doi.org/10.1016/j.micres.2023.127444
GUT_Liebre_16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut microbiota of Iberian hares living in organic and conventional farmland. 21/10/2018 26/01/2019 False True 0 148 NCBI SRA PRJNA1168362 https://doi.org/10.1016/j.envpol.2025.125862
GUT_LinceIberico_16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut microbiota of Iberian lynx in the ex-situ conservation breeding programme. False False 0 NCBI SRA PRJNA1481532
GUT_AnelidosArticos_16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut symbionts of the Arctic peat-soil worm Enchytraeus crypticus and their role in supplying essential amino acids. False True 0 128 GenBank LM999772-LM999899 https://doi.org/10.1111/1365-2656.12563
PHYL_BosqueEncinasMed_16S (CEAB) Plants Ecology of the Global Microbiome (CEAB) Nitrifying microbes on tree canopies and their contribution to nitrate fluxes in a Mediterranean holm oak forest. 01/08/2016 01/12/2016 False True 0 24 NCBI SRA PRJNA560873 https://doi.org/10.1111/1365-2745.13288
PHYL_BosquesHayaPino_16S (CEAB) Plants Ecology of the Global Microbiome (CEAB) Contribution of nitrifiers on beech and pine canopies to nitrogen fluxes in European forests. 01/01/2016 31/12/2017 False True 0 45 NCBI SRA PRJNA859654 https://doi.org/10.1038/s41561-023-01364-3
SOIL_GradienteOrdesa_16S (CEAB) Soil Ecology of the Global Microbiome (CEAB) Soil microbiota along an altitudinal gradient of Ordesa y Monte Perdido National Park, within a biodiversity monitoring project for global change. False True 0 72
SOIL_MonegrosGallocanta_16S (CEAB) Soil Ecology of the Global Microbiome (CEAB) Composition, potential functions and novelty of the microbial communities of gypsum-rich and hypersaline soils of Monegros and Gallocanta. 07/10/2010 17/07/2014 False True 0 34 NCBI SRA PRJNA420947 https://doi.org/10.1016/j.scitotenv.2018.09.050
SOIL_RizosferaOlivos_16S (CEAB) Soil Ecology of the Global Microbiome (CEAB) Nitrifying archaea and bacteria in the rhizosphere of 96 olive orchards and the soil, climate and management factors that shape them. 01/05/2009 31/07/2009 False True 0 146 NCBI SRA PRJNA276257 https://doi.org/10.1371/journal.pone.0125787
SOIL_RizosferaOlivos_16S_ArchaeaAbundance (CEAB) Soil Ecology of the Global Microbiome (CEAB) Relative abundance of archaeal groups (16S rRNA gene cloning vs pyrotag) derived from the samples of SOIL_RizosferaOlivos_16S (CEAB). 01/01/2009 31/12/2009 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1371/journal.pone.0125787
SOIL_RizosferaPlantasRaras_16S (CEAB) Plants Ecology of the Global Microbiome (CEAB) Root-associated bacteria (and aboveground arthropod visitors) of rare plant species in large and small populations. False True 0 81 https://doi.org/10.1016/j.ppees.2026.125930
False False 0
Lactic acid bacteria (IPLA) Human MicroHealth True False 9
Bifidobacteria (IPLA) Human MicroHealth True False 16
Streptococcus (IPLA) Human MicroHealth True False 9
MARINHET_ICM_Tara Aquatic Ecology of Marine Microbes-PI: S.Acinas (ICM) MARINHET True False 1246
Fungal Microbiome of Festuca rubra subsp. pruinosa Plants Plant Microbiome Collection Fungal Microbiome of Plants Survey of fungal endophytes in wild plants True False 130 https://doi.org/10.3389/fmicb.2018.03321
Fungal Microbiome of Celtica gigantea Plants Plant Microbiome Collection Fungal Microbiome of Plants Survey of fungal endophytes in wild plants True False 27 https://doi.org/10.1016/j.plantsci.2020.110762
Lactic acid bacteria MΓ‘laga (INIA) Food TecnologΓ­a de Productos LΓ‘cteos y CΓ‘rnicos (Dpto. TecnologΓ­a de Alimentos) Lactic acid bacteria biodiversity in raw goat milk cheeses from MΓ‘laga 14/06/2011 18/10/2011 True False 19 10 http://dx.doi.org/10.1016/j.idairyj.2015.09.010 https://doi.org/10.1016/j.ijfoodmicro.2019.03.011
Lactic acid bacteria CΓ‘diz (INIA) Food TecnologΓ­a de Productos LΓ‘cteos y CΓ‘rnicos (Dpto. TecnologΓ­a de Alimentos) Lactic acid bacteria isolated from raw milk cheeses in CΓ‘diz 14/06/2012 13/11/2012 True False 0 12 http://dx.doi.org/10.1016/j.idairyj.2015.09.010 https://doi.org/10.1016/j.ijfoodmicro.2019.03.011