| Styela plicata microbiome - spatio-temporal dynamics (CEAB) |
5 adults × 8 timepoints (Jan/Apr/Jul/Oct 2020–2021) × 2 compartments (gill, tunic) × 2 harbours ≈ 160 ascidian + ≈ 28 seawater samples. 2 tunic samples failed QC (BLA245, VIL206). All sequences co-analysed with PRJNA982737 (Galià-Camps et al. 2023) but deposited separately. |
Animal |
Molecular ecology of marine benthos |
|
Spatio-temporal dynamics of Styela plicata microbiome (gill, tunic, seawater) sampled quarterly Jan 2020–Oct 2021 in two NW Mediterranean harbours; seasonal patterns, harbour differences and trace element correlations |
|
15/1/20 |
28/10/21 |
False |
True |
0 |
|
188 |
|
NCBI |
PRJNA1030313 |
10.1016/j.marpolbul.2024.116477 |
| Didemnum vexillum microbiome - global survey ZOTUs (CEAB) |
Derived product from collection "Didemnum vexillum microbiome - global survey (CEAB)" (PRJNA608680). 4,323 ZOTUs x 73 samples. Table S1 available as supplementary material of the article. No individual OMICS rows — this collection documents the ZOTU table as a whole. |
Animal |
Molecular ecology of marine benthos |
|
Bioinformatic product (ZOTU table) from global survey of D. vexillum microbiome; 4,323 ZOTUs detected across 73 samples from 13 localities in 7 countries |
|
1/1/15 |
31/12/16 |
False |
True |
0 |
|
4323 |
|
Other |
|
10.3389/fmars.2020.00201 |
| Malaspina Ketobacter Isolate (Shanghai Jiao Tong University) |
|
Aquatic |
|
Malaspina Expedition |
|
|
|
|
False |
True |
1 |
|
|
|
ENA |
PRJNA493151 |
|
| Clostridia (IPLA) |
|
Human |
MicroHealth |
|
|
|
|
|
False |
False |
2 |
|
|
|
|
|
|
| Blautia (IPLA) |
|
Human |
MicroHealth |
|
|
|
|
|
False |
False |
3 |
|
|
|
|
|
|
| Yeast from artichoke (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
3 |
|
|
|
|
|
|
| Yeast from beer bagasse (BSG) (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
6 |
|
|
|
|
|
|
| Lactic acid bacteria (IPLA) |
|
Human |
MicroHealth |
|
|
|
|
|
True |
False |
9 |
|
|
|
|
|
|
| Streptococcus (IPLA) |
|
Human |
MicroHealth |
|
|
|
|
|
True |
False |
9 |
|
|
|
|
|
|
| Bacteria from Gamoneu cheese rind (IPLA) |
|
Food |
MicroHealth |
|
|
|
2020 |
2024 |
False |
False |
11 |
|
|
|
|
|
|
| Bacteria from whey (rennet coagulated milk in the lab) (IPLA) |
|
Food |
MicroHealth |
|
|
|
2020 |
2024 |
False |
False |
13 |
|
|
|
|
|
|
| Bifidobacteria (IPLA) |
|
Human |
MicroHealth |
|
|
|
|
|
True |
False |
16 |
|
|
|
|
|
|
| Lactic acid bacteria Málaga (INIA) |
|
Food |
Tecnología de Productos Lácteos y Cárnicos (Dpto. Tecnología de Alimentos) |
|
Lactic acid bacteria biodiversity in raw goat milk cheeses from Málaga |
|
14/06/2011 |
18/10/2011 |
True |
False |
19 |
|
10 |
|
|
|
http://dx.doi.org/10.1016/j.idairyj.2015.09.010
https://doi.org/10.1016/j.ijfoodmicro.2019.03.011 |
| Fungal Microbiome of Celtica gigantea |
|
Plants |
Plant Microbiome Collection |
Fungal Microbiome of Plants |
Survey of fungal endophytes in wild plants |
|
|
|
True |
False |
27 |
|
|
|
|
|
https://doi.org/10.1016/j.plantsci.2020.110762 |
| Bacteria from artichoke (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
31 |
|
|
|
|
|
|
| MARINHET_ICM_ATP09 |
|
Aquatic |
Ecology of Marine Microbes |
MARINHET |
|
|
|
|
False |
False |
33 |
|
|
|
|
|
|
| Bacteria from beer bagasse (BSG) (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
34 |
|
|
|
|
|
|
| Isolates from the human gastrointestinal tract (IPLA) |
|
Human |
MicroHealth, MicroHealth, MicroHealth, MicroHealth |
|
|
|
|
|
False |
False |
34 |
|
|
|
|
|
|
| Bacteria from apple pomace (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
89 |
|
|
|
|
|
|
| Yeast from apple pomace (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
92 |
|
|
|
|
|
|
| MED_ICM |
|
Aquatic |
Ecology of Marine Microbes |
|
|
|
|
|
False |
False |
125 |
|
|
|
|
|
|
| Fungal Microbiome of Festuca rubra subsp. pruinosa |
|
Plants |
Plant Microbiome Collection |
Fungal Microbiome of Plants |
Survey of fungal endophytes in wild plants |
|
|
|
True |
False |
130 |
|
|
|
|
|
https://doi.org/10.3389/fmicb.2018.03321 |
| MARINHET_ICM_BBMO |
|
Aquatic |
Ecology of Marine Microbes |
BBMO temporal series, MARINHET |
|
|
|
|
False |
False |
134 |
|
|
|
|
|
|
| Colección de Hongos Micorrícicos Arbusculares (EEZ) |
|
Terrestrial |
EEZ-Mycorrhizal Ecology Lab |
Arbuscular Mycorrhizal Fungi |
|
|
|
|
False |
False |
210 |
|
|
|
|
|
|
| MARINHET_ICM_MIFASOL |
|
Aquatic |
Ecology of Marine Microbes |
MARINHET |
|
|
|
|
False |
False |
245 |
|
|
|
|
|
|
| MARINHET_ICM_Malaspina |
|
Aquatic |
Ecology of Marine Microbes |
Malaspina Expedition, MARINHET |
|
|
|
|
False |
False |
343 |
|
|
|
|
|
|
| MARINHET_ICM_Tara |
|
Aquatic |
Ecology of Marine Microbes |
MARINHET |
|
|
|
|
True |
False |
1246 |
|
|
|
|
|
|
| REMEI (ICM) |
|
Aquatic |
Ecology of Marine Microbes |
|
|
|
|
|
False |
False |
1643 |
|
|
|
|
|
|
| MARINHET_ICM |
|
Aquatic |
Ecology of Marine Microbes |
MARINHET |
|
|
|
|
False |
False |
2001 |
|
|
|
|
|
|
