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Nombre Notas Biomas Grupos de investigaciΓ³n Proyectos Objeto de estudio Origen del microbioma Fecha inicial Fecha final Cultivo Datos Γ³micos NΒΊ Aislados NΒΊ Metagenomas NΒΊ Muestras AnΓ‘lisis genΓ³mico Repositorio Accession ID Publicaciones
rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) Human Microbial Ecology, Nutrition and Health Kinship perspective study on subjects with celiac disease with first-degree non-celiac relatives 01/04/2022 False True 0 6 ENA PRJEB74092
rrn operon ONT sequencing from human feces - COVID patients (IATA) Human Microbial Ecology, Nutrition and Health Gut microbial signatures in hospitalised patients under SARS-CoV-2 infection 01/10/2020 False True 0 119 ENA PRJEB102567
rrn operon ONT sequencing from human feces - FMT (IATA) Human Microbial Ecology, Nutrition and Health Strand-wise and bait-assisted assembly of nearly-full rrn operons and its application to assess species engraftment after faecal microbiota transplantation 10/04/2017 False True 0 3 ENA PRJEB33947 10.1101/2020.09.11.292896
V3-V4 16S amplicons from human feces - AXOS intervention (IATA) Human Microbial Ecology, Nutrition and Health Metagenomic assessment of AXOS intake in overweight individuals (follow-up shotgun metagenomics on responders from an earlier 16S-based AXOS study) 04/08/2014 False True 0 30 ENA PRJEB25727 10.1128/mSystems.00209-19
V3-V4 16S amplicons from human feces - UCI patients (IATA) Human Microbial Ecology, Nutrition and Health Multi-centre study to assess the intestinal microbiota of ICU patients upon admission and follow-up of those with a sepsis diagnosis 05/06/2017 29/01/2018 False True 0 250 ENA PRJEB33360 10.1080/19490976.2019.1707610
V3-V4 16S amplicons from human feces - newborns with CeD (IATA) Human Microbial Ecology, Nutrition and Health Gut microbiota trajectory in early life may predict development of celiac disease False True 0 39 ENA PRJEB23313 10.1186/s40168-018-0415-6
V3-V4 16S amplicons from human feces - obese+IR children (IATA) Human Microbial Ecology, Nutrition and Health Gut microbiota of obese children relates to intestinal inflammation and metabolic phenotype worsening 01/03/2013 False True 0 51 ENA PRJEB37005 10.1128/mSystems.00857-19
V3-V4 16S amplicons from human feces - Wilson Disease (IATA) Human Microbial Ecology, Nutrition and Health Metabolic dysfunction and drug-host-microbe interactions in the Wilson's Disease gut-liver axis 01/02/2021 01/06/2023 False True 0 60 ENA PRJEB104642
V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) Animal Microbial Ecology, Nutrition and Health Extracellular vesicles from mesenchymal stem cells impact on motor impairment and gut microbiota 01/02/2022 False True 0 56 ENA PRJEB71610
V3-V4 16S amplicons from rats - probiotic safety assay (IATA) Animal Microbial Ecology, Nutrition and Health Faecal microbiota assessment on rats under sub-chronical oral administration of Bacteroides uniformis CECT 7771 30/11/2017 False True 0 42 ENA PRJEB35764 10.3390/nu12020551
Shotgun sequencing from human feces - caloric restriction intervention (IATA) Human Microbial Ecology, Nutrition and Health Multi-omics analysis on overweight subjects under a caloric restriction intervention with fibre supplementation and placebo-controlled False True 0 160 ENA PRJEB36898 10.1002/mnfr.202000996
V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) Animal Microbial Ecology, Nutrition and Health Synbiotic treatment of mice against diet-induced obesity: Bacteroides uniformis CECT 7771 combined with wheat-bran extract (WBE)-based fibre used as an innovative synbiotic product reducing diet-induced obesity in mice 01/11/2019 False True 0 50 ENA PRJEB37867 10.1080/19490976.2020.1865706
V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) Animal Microbial Ecology, Nutrition and Health Holdemanella biformis improves glucose tolerance via GLP-1 signalling in diet-induced obese mice 01/06/2018 False True 0 28 ENA PRJEB38356 10.1096/fj.202100126R
V3-V4 - 16S amplicons from mice/probiotic properties 3 (IATA) Animal Microbial Ecology, Nutrition and Health Interactions between immunity, diet, and Bacteroides uniformis CECT 7771 11/11/2019 False True 0 62 ENA PRJEB46294
V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) Animal Microbial Ecology, Nutrition and Health Microbiota analysis on obese mice following high-fat and high-sugar diet and oral administration of Phascolarctobacterium faecium DSM 32890 11/11/2019 False True 0 29 ENA PRJEB66189
False False 0
AIR_MetroBarcelona_16S (CEAB) Air Ecology of the Global Microbiome (CEAB) Bacterial composition and abundance of airborne particles inside trains, on platforms and in lobbies of the Barcelona subway over four months. 18/11/2013 11/02/2014 False True 0 136 GenBank LT158063-LT158198 https://doi.org/10.1111/ina.12343
AIR_MontanaMontseny_16S18S (CEAB) Soil, Air Ecology of the Global Microbiome (CEAB) Airborne bacteria and eukaryotes collected over almost three decades at a Montseny mountain station, and the influence of North African desert dust. 05/12/1987 27/03/2015 False True 0 194 NCBI SRA PRJNA1004844 https://doi.org/10.1111/1462-2920.70046
AIR_MontanaMontseny_BacterialAirCore (CEAB) Soil, Air Ecology of the Global Microbiome (CEAB) Bacterial air-core zOTUs derived from the samples of AIR_MontanaMontseny_16S18S (CEAB). 05/12/1987 27/03/2015 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1111/1462-2920.70046
AIR_MontanaMontseny_EukaryalAirCore (CEAB) Soil, Air Ecology of the Global Microbiome (CEAB) Eukaryal air-core zOTUs derived from the samples of AIR_MontanaMontseny_16S18S (CEAB). 05/12/1987 27/03/2015 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1111/1462-2920.70046
AIR_MontanaPirineos_16S18S (CEAB) Air Ecology of the Global Microbiome (CEAB) Seasonal patterns of airborne bacteria and eukaryotes in a long time series (2007-2013) in the Pyrenees, and their link to atmospheric circulation. 15/05/2007 15/10/2013 False True 0 274 ENA PRJEB14358 https://doi.org/10.1073/pnas.1812826115
AIR_MontanaSierraNevada_16S (CEAB) Air Ecology of the Global Microbiome (CEAB) Bacterial composition of atmospheric deposition at high elevation in Sierra Nevada, compared with the free troposphere. 21/06/2006 07/10/2008 False True 0 54 NCBI SRA PRJNA509787 https://doi.org/10.1016/j.atmosenv.2019.01.038
AIR_ValleEbro_16S (CEAB) Soil, Aquatic, Plants, Air Ecology of the Global Microbiome (CEAB) Airborne microbial communities (16S rRNA gene) of the steppe and mountain areas of the Ebro Valley and their potential source environments (DRYLANDS project). 03/02/2026 03/06/2026 False False 0 83
AIR_ValleEbro_Metagenoma (CEAB) Soil, Aquatic, Air Ecology of the Global Microbiome (CEAB) Airborne microbial metagenomes of the steppe and mountain areas of the Ebro Valley and their potential source environments (DRYLANDS project). 03/02/2026 03/06/2026 False False 0 25
AQC_EfluentesDepuradoras_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Microbial communities (16S rRNA gene) along experimental river channels at different times, seeded with wastewater treatment plant effluent (Urban River Lab). 27/03/2017 12/09/2018 False False 0 302
AQC_LagosAlpinosNeuston_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Bacteria and archaea of the surface microlayer (neuston) and the underlying plankton in three Pyrenean lakes under two atmospheric aerosol conditions. 18/09/2007 12/11/2007 False True 0 12 CAMERA CAM_P_0000910 https://doi.org/10.1111/1574-6941.12068
AQC_LagosAlpinos_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Bacterioplankton assembly across more than 300 Pyrenean lakes and the environmental sources of their bacteria. 01/07/2011 20/09/2011 False True 0 304 NCBI SRA PRJNA413654 https://doi.org/10.1111/1462-2920.14848
AQC_LagosAlpinos_18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Diversity of planktonic eukaryotes (autotrophs, heterotrophs and parasites) across Pyrenean mountain lakes. 01/07/2011 20/09/2011 False True 0 227 NCBI SRA PRJNA413654 https://doi.org/10.1038/s41598-018-22835-3
AQC_LagosAlpinos_Cloning16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Vertical distribution and phylogeny of ammonia-oxidizing archaea in the water column of the deep Lake Redon (Pyrenees). 20/09/2007 17/04/2008 False True 0 162 GenBank HE589603-HE589764 https://doi.org/10.1038/ismej.2012.33
AQC_LagosAlpinos_Cloning16S_AmoAOTUs (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) amoA gene OTUs derived from the clone libraries of the samples of AQC_LagosAlpinos_Cloning16S (CEAB). 20/09/2007 17/04/2008 False True 0 GenBank HE598566-HE598696 https://doi.org/10.1038/ismej.2012.33
AQC_LagosAlpinos_Cloning18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Genetic diversity of planktonic eukaryotes in 11 high-mountain lakes of the Central Pyrenees. 01/07/2008 31/07/2008 False True 0 343 GenBank HE655089-HE655431 https://doi.org/10.1111/j.1462-2920.2012.02797.x
AQC_LagosAlpinos_Metagenoma (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Taxonomy and functional potential (C, N, S and P cycling) of the microbial community in the upper and bottom waters of Lake Redon (Pyrenees). 25/09/2013 25/09/2013 False True 0 2 ENA PRJEB6029 https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosAlpinos_Metagenoma_16SOrderTable (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Order-level taxonomic composition of the prokaryotes (16S rRNA gene reads), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). 25/09/2013 25/09/2013 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosAlpinos_Metagenoma_18SOrderTable (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Order-level taxonomic composition of the eukaryotes (18S rRNA gene reads), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). 25/09/2013 25/09/2013 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosAlpinos_Metagenoma_FunctionalGenes (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Abundance of C, N, S and P cycling marker genes (KEGG), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). 25/09/2013 25/09/2013 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1016/j.scitotenv.2019.135929
AQC_LagosBanyoles_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Bacterial diversity and novelty in the deep sulfurous waters of three lakes of the Banyoles karstic area. 08/05/2010 08/05/2010 False True 0 18 ENA PRJEB5429 https://doi.org/10.1007/s00248-015-0696-2
AQC_LagosBanyoles_16S_NovelOTUs (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Novel OTUs (highest novelty plot area) derived from the samples of AQC_LagosBanyoles_16S (CEAB). 08/05/2010 08/05/2010 False True 0 Supplementary material (article) No own accession see article DOI https://doi.org/10.1007/s00248-015-0696-2
AQC_LagosBanyoles_18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Protist diversity in the sulfidic waters of the Banyoles karstic lakes, from 454 pyrotag sequencing of six samples. 10/05/2010 10/05/2010 False True 0 455 GenBank LN735563-LN736017 https://doi.org/10.1111/1758-2229.12324
AQC_LagosBanyoles_DGGE18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Protist diversity in sulfurous karstic lakes and coastal lagoons, from DGGE fingerprinting of 40 water samples. 12/07/1989 10/07/2002 False True 0 108 GenBank AJ862378-AJ862487 https://doi.org/10.1111/1758-2229.12324
AQC_LagosBanyoles_Metagenoma (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Taxonomic diversity and functional potential of the microbial community of the sulfurous lakes CisοΏ½ and Banyoles (basin C-III). 08/05/2010 09/05/2010 False True 0 12 CAMERA CAM_P_0001174 https://doi.org/10.1038/ismej.2014.254
AQC_LagosBanyoles_Metagenoma_TaxFuncTables (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Taxonomic composition and functional processes derived from the metagenomes of AQC_LagosBanyoles_Metagenoma (CEAB). 08/05/2010 09/05/2010 False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1038/ismej.2014.254
AQC_LagosHipersalinosChile_DGGE16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Free-living bacterial diversity in natural brines and laboratory Artemia cultures of Chilean hypersaline environments. False True 0 46 GenBank LK391422-LK391467 https://doi.org/10.1007/s00792-014-0694-1
AQC_LagosMonegros_16S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Microbial community assembly along a wide salinity gradient (0.1-40%) in shallow saline ponds of the Monegros Desert. 12/11/2012 30/04/2014 False True 0 274 NCBI SRA PRJNA429605 https://doi.org/10.1038/s41396-019-0454-4
AQC_LagosMonegros_DGGE16S18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Bacterial, archaeal and eukaryal diversity and novelty in saline shallow lakes of the Monegros Desert, in winter and spring. 21/12/2004 25/05/2005 False True 0 80 GenBank AM071495-AM071509, AM072914, AM072916-AM072918, AM072920-AM072921, AM072923, AM072928, AM072930, AM072932-AM072939, AM085949-AM085957, AM085959-AM085962, AM085964, AM085966-AM085969, AM085971, AM085973-AM085974, AM085976-AM085993, AM087460-AM087468 https://doi.org/10.1111/1574-6941.12139
AQC_LagosMonegros_DGGE18S (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Diversity and novelty of planktonic protists in 34 coastal and inland saline ponds of Spain and Chile. 01/05/1992 30/06/2005 False True 0 114 GenBank AM072914-AM072938, AM084278-AM084326, AM087460-AM087468, AM179805-AM179824, AM231690-AM231700 https://doi.org/10.1111/1574-6941.12095
AQC_LagosMonegros_DGGE18S_ClosestMatches (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Closest environmental and cultured matches (BLAST) derived from the 18S rRNA gene sequences of AQC_LagosMonegros_DGGE18S (CEAB). False True 0 Supplementary material (article) No own accession - see article DOI https://doi.org/10.1111/1574-6941.12095
AQC_LagosMonegros_Metagenoma (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Shotgun metagenomes of the microbial communities of three Monegros hypersaline lakes sampled over two years. 13/11/2012 23/12/2014 False False 0 41
AQC_RiosMontseny_16S_2022 (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Effect of organic carbon availability on ammonium uptake and on the microbial community of an intermittent Mediterranean stream (Fuirosos). 28/03/2019 20/02/2020 False True 0 86 NCBI SRA PRJNA881938 https://doi.org/10.1111/fwb.14152
AQC_RiosMontseny_16S_2024 (CEAB) Aquatic Ecology of the Global Microbiome (CEAB) Influence of organic matter composition and nutrient ratios on nitrate uptake by microbes in nine Mediterranean streams and wetlands. 19/04/2021 12/05/2021 False True 0 NCBI SRA PRJNA1131982 https://doi.org/10.1029/2024JG008346
GUT_Artemia_DGGE16S (CEAB) Animal Ecology of the Global Microbiome (CEAB) Gut bacteria of wild and laboratory Artemia from Chilean hypersaline sites, compared with the bacteria of the surrounding brine. False True 0 37 GenBank LK391468-LK391504 https://doi.org/10.1007/s00792-014-0694-1