| Yeast from beer bagasse (BSG) (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
6 |
|
|
|
|
|
|
| Yeast from artichoke (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
3 |
|
|
|
|
|
|
| Bacteria from apple pomace (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
89 |
|
|
|
|
|
|
| Yeast from apple pomace (IPLA) |
|
Food |
MicroHealth |
|
|
|
|
|
False |
False |
92 |
|
|
|
|
|
|
| Isolates from the human gastrointestinal tract (IPLA) |
|
Human |
MicroHealth, MicroHealth, MicroHealth, MicroHealth |
|
|
|
|
|
False |
False |
34 |
|
|
|
|
|
|
| MARINHET_ICM |
|
Aquatic |
Ecology of Marine Microbes-PI: S.Acinas (ICM) |
MARINHET |
|
|
|
|
False |
False |
2001 |
|
|
|
|
|
|
| MARINHET_ICM_ATP09 |
|
Aquatic |
Ecology of Marine Microbes-PI: S.Acinas (ICM) |
MARINHET |
|
|
|
|
False |
False |
33 |
|
|
|
|
|
|
| MARINHET_ICM_BBMO |
|
Aquatic |
Ecology of Marine Microbes-PI: S.Acinas (ICM) |
BBMO temporal series, MARINHET |
|
|
|
|
False |
False |
134 |
|
|
|
|
|
|
| MARINHET_ICM_MIFASOL |
|
Aquatic |
Ecology of Marine Microbes-PI: S.Acinas (ICM) |
MARINHET |
|
|
|
|
False |
False |
245 |
|
|
|
|
|
|
| MARINHET_ICM_Malaspina |
|
Aquatic |
Ecology of Marine Microbes-PI: S.Acinas (ICM) |
Malaspina Expedition, MARINHET |
|
|
|
|
False |
False |
343 |
|
|
|
|
|
|
| MARINHET_ICM_Tara |
|
Aquatic |
Ecology of Marine Microbes-PI: S.Acinas (ICM) |
MARINHET |
|
|
|
|
True |
False |
1246 |
|
|
|
|
|
|
| Fungal Microbiome of Festuca rubra subsp. pruinosa |
|
Plants |
Plant Microbiome Collection |
Fungal Microbiome of Plants |
Survey of fungal endophytes in wild plants |
|
|
|
True |
False |
130 |
|
|
|
|
|
https://doi.org/10.3389/fmicb.2018.03321 |
| Fungal Microbiome of Celtica gigantea |
|
Plants |
Plant Microbiome Collection |
Fungal Microbiome of Plants |
Survey of fungal endophytes in wild plants |
|
|
|
True |
False |
27 |
|
|
|
|
|
https://doi.org/10.1016/j.plantsci.2020.110762 |
| MED_ICM |
|
Aquatic |
Ecology of Marine Microbes-PI: P.Gasol (ICM) |
|
|
|
|
|
False |
False |
125 |
|
|
|
|
|
|
| Metagenomes_assembled_genomes_MAGs_nondereplicated (ICM) |
|
Aquatic |
EMM - LOGLAB (ICM) |
|
|
|
|
|
False |
False |
0 |
|
|
|
ZENODO |
|
https://doi.org/10.5281/zenodo.17159964 |
| REMEI (ICM) |
|
Aquatic |
Ecology of Marine Microbes-PI: P.Gasol (ICM) |
|
|
|
|
|
False |
False |
1643 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
False |
False |
0 |
|
|
|
|
|
|
| Tick Metataxonomies (5 pooled samples) |
|
Animal |
SabiO-Microbioomics Lab |
|
Exploring tick microbiota of Hyalomma lusitanicum |
|
|
|
False |
True |
0 |
|
5 pooled samples |
|
SRA |
PRJNA681858 |
https://doi.org/10.1016/j.ttbdis.2020.101624 |
| Tick metataxonomies |
|
Animal |
SabiO-Microbioomics Lab |
|
Host specificity and network structure of tick microbiota |
|
|
|
False |
True |
0 |
|
46 |
|
SRA |
PRJNA1270924 |
https://doi.org/10.1002/ece3.71714Digital Object Identifier (DOI) |
| rrn operon ONT sequencing from human feces - CeD patients and relatives (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Kinship perspective study on subjects with celiac disease with first-degree non-celiac relatives |
|
01/04/2022 |
|
False |
True |
0 |
|
6 |
|
ENA |
PRJEB74092 |
|
| rrn operon ONT sequencing from human feces - COVID patients (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Gut microbial signatures in hospitalised patients under SARS-CoV-2 infection |
|
01/10/2020 |
|
False |
True |
0 |
|
119 |
|
ENA |
PRJEB102567 |
|
| rrn operon ONT sequencing from human feces - FMT (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Strand-wise and bait-assisted assembly of nearly-full rrn operons and its application to assess species engraftment after faecal microbiota transplantation |
|
10/04/2017 |
|
False |
True |
0 |
|
3 |
|
ENA |
PRJEB33947 |
10.1101/2020.09.11.292896 |
| V3-V4 16S amplicons from human feces - AXOS intervention (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Metagenomic assessment of AXOS intake in overweight individuals (follow-up shotgun metagenomics on responders from an earlier 16S-based AXOS study) |
|
04/08/2014 |
|
False |
True |
0 |
|
30 |
|
ENA |
PRJEB25727 |
10.1128/mSystems.00209-19 |
| V3-V4 16S amplicons from human feces - newborns with CeD (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Gut microbiota trajectory in early life may predict development of celiac disease |
|
|
|
False |
True |
0 |
|
39 |
|
ENA |
PRJEB23313 |
10.1186/s40168-018-0415-6 |
| V3-V4 16S amplicons from human feces - obese+IR children (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Gut microbiota of obese children relates to intestinal inflammation and metabolic phenotype worsening |
|
01/03/2013 |
|
False |
True |
0 |
|
51 |
|
ENA |
PRJEB37005 |
10.1128/mSystems.00857-19 |
| V3-V4 16S amplicons from rats - extracellular vesicles intervention (IATA) |
|
Animal |
Microbial Ecology, Nutrition and Health |
|
Extracellular vesicles from mesenchymal stem cells impact on motor impairment and gut microbiota |
|
01/02/2022 |
|
False |
True |
0 |
|
56 |
|
ENA |
PRJEB71610 |
|
| V3-V4 16S amplicons from rats - probiotic safety assay (IATA) |
|
Animal |
Microbial Ecology, Nutrition and Health |
|
Faecal microbiota assessment on rats under sub-chronical oral administration of Bacteroides uniformis CECT 7771 |
|
30/11/2017 |
|
False |
True |
0 |
|
42 |
|
ENA |
PRJEB35764 |
10.3390/nu12020551 |
| Shotgun sequencing from human feces - caloric restriction intervention (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Multi-omics analysis on overweight subjects under a caloric restriction intervention with fibre supplementation and placebo-controlled |
|
|
|
False |
True |
0 |
|
160 |
|
ENA |
PRJEB36898 |
10.1002/mnfr.202000996 |
| V3-V4 - 16S amplicons from mice/probiotic properties 1 (IATA) |
|
Animal |
Microbial Ecology, Nutrition and Health |
|
Synbiotic treatment of mice against diet-induced obesity: Bacteroides uniformis CECT 7771 combined with wheat-bran extract (WBE)-based fibre used as an innovative synbiotic product reducing diet-induced obesity in mice |
|
01/11/2019 |
|
False |
True |
0 |
|
50 |
|
ENA |
PRJEB37867 |
10.1080/19490976.2020.1865706 |
| V3-V4 - 16S amplicons from mice/probiotic properties 2 (IATA) |
|
Animal |
Microbial Ecology, Nutrition and Health |
|
Holdemanella biformis improves glucose tolerance via GLP-1 signalling in diet-induced obese mice |
|
01/06/2018 |
|
False |
True |
0 |
|
28 |
|
ENA |
PRJEB38356 |
10.1096/fj.202100126R |
| V3-V4 - 16S amplicons from mice/probiotic properties 3 (IATA) |
|
Animal |
Microbial Ecology, Nutrition and Health |
|
Interactions between immunity, diet, and Bacteroides uniformis CECT 7771 |
|
11/11/2019 |
|
False |
True |
0 |
|
62 |
|
ENA |
PRJEB46294 |
|
| V3-V4 - 16S amplicons from mice/probiotic properties 4 (IATA) |
|
Animal |
Microbial Ecology, Nutrition and Health |
|
Microbiota analysis on obese mice following high-fat and high-sugar diet and oral administration of Phascolarctobacterium faecium DSM 32890 |
|
11/11/2019 |
|
False |
True |
0 |
|
29 |
|
ENA |
PRJEB66189 |
|
|
|
|
|
|
|
|
|
|
False |
False |
0 |
|
|
|
|
|
|
| AQC_LagosHipersalinosChile_DGGE16S (CEAB) |
|
Aquatic |
Ecology of the Global Microbiome (CEAB) |
|
Free-living bacterial diversity in natural brines and laboratory Artemia cultures of Chilean hypersaline environments. |
|
|
|
False |
True |
0 |
|
46 |
|
GenBank |
LK391422-LK391467 |
https://doi.org/10.1007/s00792-014-0694-1 |
| AQC_LagosMonegros_DGGE18S_ClosestMatches (CEAB) |
|
Aquatic |
Ecology of the Global Microbiome (CEAB) |
|
Closest environmental and cultured matches (BLAST) derived from the 18S rRNA gene sequences of AQC_LagosMonegros_DGGE18S (CEAB). |
|
|
|
False |
True |
0 |
|
|
|
Supplementary material (article) |
No own accession - see article DOI |
https://doi.org/10.1111/1574-6941.12095 |
| GUT_Artemia_DGGE16S (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut bacteria of wild and laboratory Artemia from Chilean hypersaline sites, compared with the bacteria of the surrounding brine. |
|
|
|
False |
True |
0 |
|
37 |
|
GenBank |
LK391468-LK391504 |
https://doi.org/10.1007/s00792-014-0694-1 |
| GUT_Conejo_16S_2020 (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut microbiota of wild European rabbits, in the field and in captivity, and its link to host and environmental factors. |
|
|
|
False |
True |
0 |
|
126 |
|
NCBI SRA / MGnify |
SRP129755 |
https://doi.org/10.1038/s41598-020-80782-4 |
| GUT_LinceIberico_16S (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut microbiota of Iberian lynx in the ex-situ conservation breeding programme. |
|
|
|
False |
False |
0 |
|
|
|
NCBI SRA |
PRJNA1481532 |
|
| GUT_AnelidosArticos_16S (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut symbionts of the Arctic peat-soil worm Enchytraeus crypticus and their role in supplying essential amino acids. |
|
|
|
False |
True |
0 |
|
128 |
|
GenBank |
LM999772-LM999899 |
https://doi.org/10.1111/1365-2656.12563 |
| SOIL_GradienteOrdesa_16S (CEAB) |
|
Soil |
Ecology of the Global Microbiome (CEAB) |
|
Soil microbiota along an altitudinal gradient of Ordesa y Monte Perdido National Park, within a biodiversity monitoring project for global change. |
|
|
|
False |
True |
0 |
|
72 |
|
|
|
|
| SOIL_RizosferaPlantasRaras_16S (CEAB) |
|
Plants |
Ecology of the Global Microbiome (CEAB) |
|
Root-associated bacteria (and aboveground arthropod visitors) of rare plant species in large and small populations. |
|
|
|
False |
True |
0 |
|
81 |
|
|
|
https://doi.org/10.1016/j.ppees.2026.125930 |
|
|
|
|
|
|
|
|
|
False |
False |
0 |
|
|
|
|
|
|
| GUT_Jabali_16S (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut microbiota of wild boar in Spain and its relation to population management. |
|
18/10/2019 |
01/02/2020 |
False |
True |
0 |
|
88 |
|
NCBI SRA |
PRJNA886492 |
https://doi.org/10.1016/j.micres.2023.127444 |
| GUT_Conejo_16S_2025 (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut microbiota of wild European rabbits during haemorrhagic disease outbreaks in Spain and Morocco. |
|
01/11/2019 |
01/02/2021 |
False |
True |
0 |
|
105 |
|
NCBI SRA |
PRJNA1031537 |
https://doi.org/10.1016/j.vetmic.2025.110688 |
| V3-V4 16S amplicons from human feces - Wilson Disease (IATA) |
|
Human |
Microbial Ecology, Nutrition and Health |
|
Metabolic dysfunction and drug-host-microbe interactions in the Wilson's Disease gut-liver axis |
|
01/02/2021 |
01/06/2023 |
False |
True |
0 |
|
60 |
|
ENA |
PRJEB104642 |
|
| PHYL_BosqueEncinasMed_16S (CEAB) |
|
Plants |
Ecology of the Global Microbiome (CEAB) |
|
Nitrifying microbes on tree canopies and their contribution to nitrate fluxes in a Mediterranean holm oak forest. |
|
01/08/2016 |
01/12/2016 |
False |
True |
0 |
|
24 |
|
NCBI SRA |
PRJNA560873 |
https://doi.org/10.1111/1365-2745.13288 |
| BBMO 16S rRNA gene pico- & nano-plankton (ICM) |
|
Aquatic |
EMM - LOGLAB (ICM) |
BBMO temporal series |
Temporal series of the marine observatory of Blanes Bay |
|
28/01/2003 |
02/08/2016 |
False |
True |
0 |
|
|
|
ENA |
PRJEB38773 |
|
| AIR_ValleEbro_16S (CEAB) |
|
Soil, Aquatic, Plants, Air |
Ecology of the Global Microbiome (CEAB) |
|
Airborne microbial communities (16S rRNA gene) of the steppe and mountain areas of the Ebro Valley and their potential source environments (DRYLANDS project). |
|
03/02/2026 |
03/06/2026 |
False |
False |
0 |
|
83 |
|
|
|
|
| AIR_ValleEbro_Metagenoma (CEAB) |
|
Soil, Aquatic, Air |
Ecology of the Global Microbiome (CEAB) |
|
Airborne microbial metagenomes of the steppe and mountain areas of the Ebro Valley and their potential source environments (DRYLANDS project). |
|
03/02/2026 |
03/06/2026 |
False |
False |
0 |
|
25 |
|
|
|
|
| GUT_Ciervo_16S (CEAB) |
|
Animal |
Ecology of the Global Microbiome (CEAB) |
|
Gut microbiota of Iberian red deer in relation to physiological stress, reproductive cycle and hunting management in Sierra Morena. |
|
20/10/2020 |
05/02/2022 |
False |
False |
0 |
|
224 |
|
|
|
|
