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"Ecology of the Global Microbiome (CEAB)"
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| Nombre | Notas | Biomas | Grupos de investigaciΓ³n | Proyectos | Objeto de estudio | Origen del microbioma | Fecha inicial | Fecha final | Cultivo | Datos Γ³micos | NΒΊ Aislados | NΒΊ Metagenomas | NΒΊ Muestras | AnΓ‘lisis genΓ³mico | Repositorio | Accession ID | Publicaciones |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AIR_MetroBarcelona_16S (CEAB) | Air | Ecology of the Global Microbiome (CEAB) | Bacterial composition and abundance of airborne particles inside trains, on platforms and in lobbies of the Barcelona subway over four months. | 18/11/2013 | 11/02/2014 | False | True | 0 | 136 | GenBank | LT158063-LT158198 | https://doi.org/10.1111/ina.12343 | |||||
| AIR_MontanaMontseny_16S18S (CEAB) | Soil, Air | Ecology of the Global Microbiome (CEAB) | Airborne bacteria and eukaryotes collected over almost three decades at a Montseny mountain station, and the influence of North African desert dust. | 05/12/1987 | 27/03/2015 | False | True | 0 | 194 | NCBI SRA | PRJNA1004844 | https://doi.org/10.1111/1462-2920.70046 | |||||
| AIR_MontanaMontseny_BacterialAirCore (CEAB) | Soil, Air | Ecology of the Global Microbiome (CEAB) | Bacterial air-core zOTUs derived from the samples of AIR_MontanaMontseny_16S18S (CEAB). | 05/12/1987 | 27/03/2015 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1111/1462-2920.70046 | ||||||
| AIR_MontanaMontseny_EukaryalAirCore (CEAB) | Soil, Air | Ecology of the Global Microbiome (CEAB) | Eukaryal air-core zOTUs derived from the samples of AIR_MontanaMontseny_16S18S (CEAB). | 05/12/1987 | 27/03/2015 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1111/1462-2920.70046 | ||||||
| AIR_MontanaPirineos_16S18S (CEAB) | Air | Ecology of the Global Microbiome (CEAB) | Seasonal patterns of airborne bacteria and eukaryotes in a long time series (2007-2013) in the Pyrenees, and their link to atmospheric circulation. | 15/05/2007 | 15/10/2013 | False | True | 0 | 274 | ENA | PRJEB14358 | https://doi.org/10.1073/pnas.1812826115 | |||||
| AIR_MontanaSierraNevada_16S (CEAB) | Air | Ecology of the Global Microbiome (CEAB) | Bacterial composition of atmospheric deposition at high elevation in Sierra Nevada, compared with the free troposphere. | 21/06/2006 | 07/10/2008 | False | True | 0 | 54 | NCBI SRA | PRJNA509787 | https://doi.org/10.1016/j.atmosenv.2019.01.038 | |||||
| AIR_ValleEbro_16S (CEAB) | Soil, Aquatic, Plants, Air | Ecology of the Global Microbiome (CEAB) | Airborne microbial communities (16S rRNA gene) of the steppe and mountain areas of the Ebro Valley and their potential source environments (DRYLANDS project). | 03/02/2026 | 03/06/2026 | False | False | 0 | 83 | ||||||||
| AIR_ValleEbro_Metagenoma (CEAB) | Soil, Aquatic, Air | Ecology of the Global Microbiome (CEAB) | Airborne microbial metagenomes of the steppe and mountain areas of the Ebro Valley and their potential source environments (DRYLANDS project). | 03/02/2026 | 03/06/2026 | False | False | 0 | 25 | ||||||||
| AQC_EfluentesDepuradoras_16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Microbial communities (16S rRNA gene) along experimental river channels at different times, seeded with wastewater treatment plant effluent (Urban River Lab). | 27/03/2017 | 12/09/2018 | False | False | 0 | 302 | ||||||||
| AQC_LagosAlpinosNeuston_16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Bacteria and archaea of the surface microlayer (neuston) and the underlying plankton in three Pyrenean lakes under two atmospheric aerosol conditions. | 18/09/2007 | 12/11/2007 | False | True | 0 | 12 | CAMERA | CAM_P_0000910 | https://doi.org/10.1111/1574-6941.12068 | |||||
| AQC_LagosAlpinos_16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Bacterioplankton assembly across more than 300 Pyrenean lakes and the environmental sources of their bacteria. | 01/07/2011 | 20/09/2011 | False | True | 0 | 304 | NCBI SRA | PRJNA413654 | https://doi.org/10.1111/1462-2920.14848 | |||||
| AQC_LagosAlpinos_18S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Diversity of planktonic eukaryotes (autotrophs, heterotrophs and parasites) across Pyrenean mountain lakes. | 01/07/2011 | 20/09/2011 | False | True | 0 | 227 | NCBI SRA | PRJNA413654 | https://doi.org/10.1038/s41598-018-22835-3 | |||||
| AQC_LagosAlpinos_Cloning16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Vertical distribution and phylogeny of ammonia-oxidizing archaea in the water column of the deep Lake Redon (Pyrenees). | 20/09/2007 | 17/04/2008 | False | True | 0 | 162 | GenBank | HE589603-HE589764 | https://doi.org/10.1038/ismej.2012.33 | |||||
| AQC_LagosAlpinos_Cloning16S_AmoAOTUs (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | amoA gene OTUs derived from the clone libraries of the samples of AQC_LagosAlpinos_Cloning16S (CEAB). | 20/09/2007 | 17/04/2008 | False | True | 0 | GenBank | HE598566-HE598696 | https://doi.org/10.1038/ismej.2012.33 | ||||||
| AQC_LagosAlpinos_Cloning18S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Genetic diversity of planktonic eukaryotes in 11 high-mountain lakes of the Central Pyrenees. | 01/07/2008 | 31/07/2008 | False | True | 0 | 343 | GenBank | HE655089-HE655431 | https://doi.org/10.1111/j.1462-2920.2012.02797.x | |||||
| AQC_LagosAlpinos_Metagenoma (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Taxonomy and functional potential (C, N, S and P cycling) of the microbial community in the upper and bottom waters of Lake Redon (Pyrenees). | 25/09/2013 | 25/09/2013 | False | True | 0 | 2 | ENA | PRJEB6029 | https://doi.org/10.1016/j.scitotenv.2019.135929 | |||||
| AQC_LagosAlpinos_Metagenoma_16SOrderTable (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Order-level taxonomic composition of the prokaryotes (16S rRNA gene reads), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). | 25/09/2013 | 25/09/2013 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1016/j.scitotenv.2019.135929 | ||||||
| AQC_LagosAlpinos_Metagenoma_18SOrderTable (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Order-level taxonomic composition of the eukaryotes (18S rRNA gene reads), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). | 25/09/2013 | 25/09/2013 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1016/j.scitotenv.2019.135929 | ||||||
| AQC_LagosAlpinos_Metagenoma_FunctionalGenes (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Abundance of C, N, S and P cycling marker genes (KEGG), derived from the metagenomes of AQC_LagosAlpinos_Metagenoma (CEAB). | 25/09/2013 | 25/09/2013 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1016/j.scitotenv.2019.135929 | ||||||
| AQC_LagosBanyoles_16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Bacterial diversity and novelty in the deep sulfurous waters of three lakes of the Banyoles karstic area. | 08/05/2010 | 08/05/2010 | False | True | 0 | 18 | ENA | PRJEB5429 | https://doi.org/10.1007/s00248-015-0696-2 | |||||
| AQC_LagosBanyoles_16S_NovelOTUs (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Novel OTUs (highest novelty plot area) derived from the samples of AQC_LagosBanyoles_16S (CEAB). | 08/05/2010 | 08/05/2010 | False | True | 0 | Supplementary material (article) | No own accession see article DOI | https://doi.org/10.1007/s00248-015-0696-2 | ||||||
| AQC_LagosBanyoles_18S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Protist diversity in the sulfidic waters of the Banyoles karstic lakes, from 454 pyrotag sequencing of six samples. | 10/05/2010 | 10/05/2010 | False | True | 0 | 455 | GenBank | LN735563-LN736017 | https://doi.org/10.1111/1758-2229.12324 | |||||
| AQC_LagosBanyoles_DGGE18S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Protist diversity in sulfurous karstic lakes and coastal lagoons, from DGGE fingerprinting of 40 water samples. | 12/07/1989 | 10/07/2002 | False | True | 0 | 108 | GenBank | AJ862378-AJ862487 | https://doi.org/10.1111/1758-2229.12324 | |||||
| AQC_LagosBanyoles_Metagenoma (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Taxonomic diversity and functional potential of the microbial community of the sulfurous lakes CisοΏ½ and Banyoles (basin C-III). | 08/05/2010 | 09/05/2010 | False | True | 0 | 12 | CAMERA | CAM_P_0001174 | https://doi.org/10.1038/ismej.2014.254 | |||||
| AQC_LagosBanyoles_Metagenoma_TaxFuncTables (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Taxonomic composition and functional processes derived from the metagenomes of AQC_LagosBanyoles_Metagenoma (CEAB). | 08/05/2010 | 09/05/2010 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1038/ismej.2014.254 | ||||||
| AQC_LagosHipersalinosChile_DGGE16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Free-living bacterial diversity in natural brines and laboratory Artemia cultures of Chilean hypersaline environments. | False | True | 0 | 46 | GenBank | LK391422-LK391467 | https://doi.org/10.1007/s00792-014-0694-1 | |||||||
| AQC_LagosMonegros_16S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Microbial community assembly along a wide salinity gradient (0.1-40%) in shallow saline ponds of the Monegros Desert. | 12/11/2012 | 30/04/2014 | False | True | 0 | 274 | NCBI SRA | PRJNA429605 | https://doi.org/10.1038/s41396-019-0454-4 | |||||
| AQC_LagosMonegros_DGGE16S18S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Bacterial, archaeal and eukaryal diversity and novelty in saline shallow lakes of the Monegros Desert, in winter and spring. | 21/12/2004 | 25/05/2005 | False | True | 0 | 80 | GenBank | AM071495-AM071509, AM072914, AM072916-AM072918, AM072920-AM072921, AM072923, AM072928, AM072930, AM072932-AM072939, AM085949-AM085957, AM085959-AM085962, AM085964, AM085966-AM085969, AM085971, AM085973-AM085974, AM085976-AM085993, AM087460-AM087468 | https://doi.org/10.1111/1574-6941.12139 | |||||
| AQC_LagosMonegros_DGGE18S (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Diversity and novelty of planktonic protists in 34 coastal and inland saline ponds of Spain and Chile. | 01/05/1992 | 30/06/2005 | False | True | 0 | 114 | GenBank | AM072914-AM072938, AM084278-AM084326, AM087460-AM087468, AM179805-AM179824, AM231690-AM231700 | https://doi.org/10.1111/1574-6941.12095 | |||||
| AQC_LagosMonegros_DGGE18S_ClosestMatches (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Closest environmental and cultured matches (BLAST) derived from the 18S rRNA gene sequences of AQC_LagosMonegros_DGGE18S (CEAB). | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1111/1574-6941.12095 | ||||||||
| AQC_LagosMonegros_Metagenoma (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Shotgun metagenomes of the microbial communities of three Monegros hypersaline lakes sampled over two years. | 13/11/2012 | 23/12/2014 | False | False | 0 | 41 | ||||||||
| AQC_RiosMontseny_16S_2022 (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Effect of organic carbon availability on ammonium uptake and on the microbial community of an intermittent Mediterranean stream (Fuirosos). | 28/03/2019 | 20/02/2020 | False | True | 0 | 86 | NCBI SRA | PRJNA881938 | https://doi.org/10.1111/fwb.14152 | |||||
| AQC_RiosMontseny_16S_2024 (CEAB) | Aquatic | Ecology of the Global Microbiome (CEAB) | Influence of organic matter composition and nutrient ratios on nitrate uptake by microbes in nine Mediterranean streams and wetlands. | 19/04/2021 | 12/05/2021 | False | True | 0 | NCBI SRA | PRJNA1131982 | https://doi.org/10.1029/2024JG008346 | ||||||
| GUT_Artemia_DGGE16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut bacteria of wild and laboratory Artemia from Chilean hypersaline sites, compared with the bacteria of the surrounding brine. | False | True | 0 | 37 | GenBank | LK391468-LK391504 | https://doi.org/10.1007/s00792-014-0694-1 | |||||||
| GUT_Ciervo_16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut microbiota of Iberian red deer in relation to physiological stress, reproductive cycle and hunting management in Sierra Morena. | 20/10/2020 | 05/02/2022 | False | False | 0 | 224 | ||||||||
| GUT_Conejo_16S_2020 (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut microbiota of wild European rabbits, in the field and in captivity, and its link to host and environmental factors. | False | True | 0 | 126 | NCBI SRA / MGnify | SRP129755 | https://doi.org/10.1038/s41598-020-80782-4 | |||||||
| GUT_Conejo_16S_2025 (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut microbiota of wild European rabbits during haemorrhagic disease outbreaks in Spain and Morocco. | 01/11/2019 | 01/02/2021 | False | True | 0 | 105 | NCBI SRA | PRJNA1031537 | https://doi.org/10.1016/j.vetmic.2025.110688 | |||||
| GUT_GanadoAntiparasitarios_16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Short-term changes in the microbiota and the greenhouse gas emissions of cattle dung treated with ivermectin (DoοΏ½ana). | 17/07/2017 | 17/07/2017 | False | True | 0 | 66 | NCBI SRA | PRJNA515520 | https://doi.org/10.1016/j.apsoil.2025.106704 | |||||
| GUT_Jabali_16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut microbiota of wild boar in Spain and its relation to population management. | 18/10/2019 | 01/02/2020 | False | True | 0 | 88 | NCBI SRA | PRJNA886492 | https://doi.org/10.1016/j.micres.2023.127444 | |||||
| GUT_Liebre_16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut microbiota of Iberian hares living in organic and conventional farmland. | 21/10/2018 | 26/01/2019 | False | True | 0 | 148 | NCBI SRA | PRJNA1168362 | https://doi.org/10.1016/j.envpol.2025.125862 | |||||
| GUT_LinceIberico_16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut microbiota of Iberian lynx in the ex-situ conservation breeding programme. | False | False | 0 | NCBI SRA | PRJNA1481532 | |||||||||
| GUT_AnelidosArticos_16S (CEAB) | Animal | Ecology of the Global Microbiome (CEAB) | Gut symbionts of the Arctic peat-soil worm Enchytraeus crypticus and their role in supplying essential amino acids. | False | True | 0 | 128 | GenBank | LM999772-LM999899 | https://doi.org/10.1111/1365-2656.12563 | |||||||
| PHYL_BosqueEncinasMed_16S (CEAB) | Plants | Ecology of the Global Microbiome (CEAB) | Nitrifying microbes on tree canopies and their contribution to nitrate fluxes in a Mediterranean holm oak forest. | 01/08/2016 | 01/12/2016 | False | True | 0 | 24 | NCBI SRA | PRJNA560873 | https://doi.org/10.1111/1365-2745.13288 | |||||
| PHYL_BosquesHayaPino_16S (CEAB) | Plants | Ecology of the Global Microbiome (CEAB) | Contribution of nitrifiers on beech and pine canopies to nitrogen fluxes in European forests. | 01/01/2016 | 31/12/2017 | False | True | 0 | 45 | NCBI SRA | PRJNA859654 | https://doi.org/10.1038/s41561-023-01364-3 | |||||
| SOIL_GradienteOrdesa_16S (CEAB) | Soil | Ecology of the Global Microbiome (CEAB) | Soil microbiota along an altitudinal gradient of Ordesa y Monte Perdido National Park, within a biodiversity monitoring project for global change. | False | True | 0 | 72 | ||||||||||
| SOIL_MonegrosGallocanta_16S (CEAB) | Soil | Ecology of the Global Microbiome (CEAB) | Composition, potential functions and novelty of the microbial communities of gypsum-rich and hypersaline soils of Monegros and Gallocanta. | 07/10/2010 | 17/07/2014 | False | True | 0 | 34 | NCBI SRA | PRJNA420947 | https://doi.org/10.1016/j.scitotenv.2018.09.050 | |||||
| SOIL_RizosferaOlivos_16S (CEAB) | Soil | Ecology of the Global Microbiome (CEAB) | Nitrifying archaea and bacteria in the rhizosphere of 96 olive orchards and the soil, climate and management factors that shape them. | 01/05/2009 | 31/07/2009 | False | True | 0 | 146 | NCBI SRA | PRJNA276257 | https://doi.org/10.1371/journal.pone.0125787 | |||||
| SOIL_RizosferaOlivos_16S_ArchaeaAbundance (CEAB) | Soil | Ecology of the Global Microbiome (CEAB) | Relative abundance of archaeal groups (16S rRNA gene cloning vs pyrotag) derived from the samples of SOIL_RizosferaOlivos_16S (CEAB). | 01/01/2009 | 31/12/2009 | False | True | 0 | Supplementary material (article) | No own accession - see article DOI | https://doi.org/10.1371/journal.pone.0125787 | ||||||
| SOIL_RizosferaPlantasRaras_16S (CEAB) | Plants | Ecology of the Global Microbiome (CEAB) | Root-associated bacteria (and aboveground arthropod visitors) of rare plant species in large and small populations. | False | True | 0 | 81 | https://doi.org/10.1016/j.ppees.2026.125930 |